Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vsx2 | 0.065 | elavl3 | -0.013 |
| XLOC-003718 | 0.057 | tmsb | -0.013 |
| rx1 | 0.052 | cyt1 | -0.012 |
| BX470117.1 | 0.048 | cyt1l | -0.012 |
| fzd5 | 0.045 | actc1b | -0.011 |
| rx2 | 0.041 | icn2 | -0.011 |
| cad | 0.035 | krt4 | -0.011 |
| crip3 | 0.035 | pvalb1 | -0.011 |
| mcm7 | 0.034 | myt1b | -0.010 |
| ccnd1 | 0.033 | pvalb2 | -0.010 |
| nr2e1 | 0.033 | scrt2 | -0.010 |
| pcna | 0.033 | abcb5 | -0.009 |
| rrm1 | 0.033 | hmgb3a | -0.009 |
| kpnb3 | 0.031 | hrc | -0.009 |
| shmt1 | 0.031 | krt17 | -0.009 |
| fen1 | 0.030 | krt5 | -0.009 |
| mcm4 | 0.030 | krtt1c19e | -0.009 |
| sox2 | 0.030 | mylpfa | -0.009 |
| uck2b | 0.030 | myt1a | -0.009 |
| atic | 0.029 | rtn1a | -0.009 |
| bambia | 0.029 | si:ch211-57n23.4 | -0.009 |
| mcm6 | 0.029 | si:dkeyp-51b9.3 | -0.009 |
| nutf2l | 0.029 | stmn1b | -0.009 |
| ranbp1 | 0.029 | tcnbb | -0.009 |
| rpa2 | 0.029 | wu:fa03e10 | -0.009 |
| si:dkey-102m7.3 | 0.029 | zfhx3 | -0.009 |
| snu13b | 0.029 | zgc:111983 | -0.009 |
| mcm2 | 0.028 | anxa1a | -0.008 |
| mcm3 | 0.028 | anxa1c | -0.008 |
| myca | 0.028 | caspb | -0.008 |
| pa2g4a | 0.028 | ccni | -0.008 |
| si:ch211-156b7.4 | 0.028 | cdkn1ca | -0.008 |
| tbx2b | 0.028 | ckbb | -0.008 |
| cdca7a | 0.027 | cst14b.1 | -0.008 |
| dkc1 | 0.027 | ebf2 | -0.008 |