Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vsx2 | 0.172 | xbp1 | -0.034 |
| rx1 | 0.125 | sdc4 | -0.033 |
| rx2 | 0.104 | krt8 | -0.031 |
| fzd5 | 0.102 | pmp22a | -0.031 |
| XLOC-003718 | 0.099 | sparc | -0.031 |
| crip3 | 0.091 | tpm4a | -0.031 |
| rrm1 | 0.078 | zgc:162730 | -0.030 |
| pcna | 0.076 | cd63 | -0.029 |
| mcm7 | 0.073 | ier2b | -0.029 |
| mcm4 | 0.072 | dap1b | -0.029 |
| rpa2 | 0.071 | krt18a.1 | -0.028 |
| fabp7a | 0.070 | anxa4 | -0.027 |
| six3b | 0.070 | cebpd | -0.027 |
| fen1 | 0.067 | fosab | -0.027 |
| orc4 | 0.067 | ahnak | -0.026 |
| rpa3 | 0.067 | mfap2 | -0.026 |
| unga | 0.067 | col1a2 | -0.025 |
| gins2 | 0.066 | pfn1 | -0.025 |
| mcm2 | 0.066 | wls | -0.025 |
| uck2b | 0.066 | XLOC-044191 | -0.025 |
| pax6b | 0.065 | col5a1 | -0.025 |
| rfc4 | 0.065 | si:dkey-261h17.1 | -0.025 |
| rnaseh2b | 0.065 | aldh9a1a.1 | -0.024 |
| shmt1 | 0.065 | cebpb | -0.024 |
| cad | 0.064 | cnn2 | -0.024 |
| cdca7a | 0.064 | fstl1b | -0.024 |
| nr2e1 | 0.064 | jdp2b | -0.024 |
| ccnd1 | 0.063 | krt18b | -0.024 |
| mcm5 | 0.063 | ucp2 | -0.024 |
| mcm6 | 0.063 | ier2a | -0.023 |
| si:ch211-156b7.4 | 0.062 | junba | -0.023 |
| CABZ01005379.1 | 0.061 | rnd3a | -0.023 |
| pa2g4a | 0.061 | si:ch73-335l21.4 | -0.023 |
| rnaseh2a | 0.061 | emp2 | -0.022 |
| kpnb3 | 0.060 | lrrc17 | -0.022 |