Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| rx1 | 0.084 | CR383676.1 | -0.043 |
| vsx2 | 0.068 | NC-002333.4 | -0.026 |
| crip3 | 0.067 | si:dkey-56m19.5 | -0.022 |
| BX511010.1 | 0.055 | mt-co2 | -0.022 |
| rx2 | 0.050 | mdkb | -0.022 |
| si:dkey-238o13.4 | 0.049 | marcksl1b | -0.022 |
| XLOC-043716 | 0.047 | COX3 | -0.020 |
| XLOC-003718 | 0.042 | tmsb4x | -0.019 |
| fabp7a | 0.042 | sox19a | -0.019 |
| BX649295.2 | 0.039 | mt-cyb | -0.019 |
| XLOC-044280 | 0.035 | hmgb3a | -0.018 |
| dusp19a | 0.035 | mt-co1 | -0.017 |
| BX571772.1 | 0.035 | sfpq | -0.017 |
| zgc:163079 | 0.035 | pnrc2 | -0.017 |
| myca | 0.034 | pou3f3b | -0.016 |
| sparta | 0.032 | nova2 | -0.016 |
| ggact.3 | 0.031 | ctsla | -0.016 |
| tbx5a | 0.031 | marcksl1a | -0.016 |
| AL954322.2 | 0.030 | sox11a | -0.016 |
| ahcy | 0.030 | hspb1 | -0.015 |
| fabp11a | 0.030 | elavl3 | -0.015 |
| foxd1 | 0.030 | xbp1 | -0.015 |
| hmx1 | 0.029 | sox3 | -0.015 |
| CR769777.1 | 0.029 | acin1a | -0.015 |
| hmx4 | 0.029 | sdc4 | -0.015 |
| rplp0 | 0.028 | tubb5 | -0.014 |
| si:ch211-155o21.4 | 0.028 | her4.2 | -0.014 |
| shmt1 | 0.027 | si:ch211-152c2.3 | -0.014 |
| pcna | 0.027 | atp6v0ca | -0.014 |
| nutf2l | 0.027 | XLOC-003692 | -0.014 |
| rps17 | 0.027 | spcs2 | -0.014 |
| eef1da | 0.027 | rnasekb | -0.014 |
| zgc:56493 | 0.027 | si:ch211-196l7.4 | -0.014 |
| rps26l | 0.027 | XLOC-003689 | -0.014 |
| rpl24 | 0.026 | rtn1a | -0.014 |