Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zfp36l1a | 0.095 | ckbb | -0.070 |
| vsx2 | 0.092 | atp6v0cb | -0.045 |
| LOC100536144 | 0.089 | hmgn6 | -0.045 |
| LOC108182677 | 0.088 | rnasekb | -0.042 |
| fzd5 | 0.086 | snap25b | -0.042 |
| cad | 0.086 | gpm6ab | -0.041 |
| atic | 0.084 | h3f3c | -0.039 |
| trpm2-as | 0.084 | crx | -0.038 |
| shmt1 | 0.082 | atp6v1g1 | -0.038 |
| si:dkey-102m7.3 | 0.082 | otx5 | -0.037 |
| pcna | 0.081 | vamp2 | -0.036 |
| ccnd1 | 0.080 | ppdpfb | -0.035 |
| pa2g4a | 0.078 | syt5b | -0.035 |
| mycn | 0.078 | btg1 | -0.035 |
| mcm2 | 0.077 | ndrg4 | -0.035 |
| mcm7 | 0.077 | atp6v1e1b | -0.035 |
| nutf2l | 0.077 | xbp1 | -0.034 |
| rfc4 | 0.076 | atp1b2a | -0.034 |
| id1 | 0.076 | jpt1b | -0.034 |
| XLOC-003690 | 0.075 | stmn1b | -0.034 |
| ranbp1 | 0.075 | ptmab | -0.034 |
| mcm6 | 0.075 | scrt2 | -0.033 |
| rpa2 | 0.075 | elavl3 | -0.033 |
| selenoh | 0.074 | rtn1a | -0.033 |
| snu13b | 0.074 | pvalb1 | -0.033 |
| mcm4 | 0.074 | sncb | -0.033 |
| fen1 | 0.074 | atp1a3a | -0.033 |
| paics | 0.072 | si:ch211-133n4.4 | -0.033 |
| nop58 | 0.072 | atpv0e2 | -0.032 |
| dkc1 | 0.071 | hmgb3a | -0.032 |
| mcm3 | 0.070 | gng3 | -0.032 |
| msh6 | 0.070 | neurod4 | -0.032 |
| dnph1 | 0.070 | mpp6b | -0.032 |
| ptgr1 | 0.070 | zfhx4 | -0.032 |
| uck2b | 0.069 | sypb | -0.031 |