Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| onecut3a | 0.386 | id1 | -0.168 |
| cplx2l | 0.335 | XLOC-003690 | -0.167 |
| lin28a | 0.329 | mdka | -0.152 |
| onecut1 | 0.329 | her15.1 | -0.143 |
| stmn3 | 0.299 | cldn5a | -0.140 |
| nefmb | 0.298 | notch3 | -0.137 |
| map1b | 0.287 | sox3 | -0.136 |
| CABZ01074363.1 | 0.287 | sparc | -0.128 |
| rbfox1 | 0.276 | btg2 | -0.125 |
| si:ch211-215d8.2 | 0.267 | XLOC-003689 | -0.124 |
| pcsk1nl | 0.266 | vamp3 | -0.123 |
| ywhag2 | 0.264 | sdc4 | -0.123 |
| stxbp1a | 0.261 | msi1 | -0.119 |
| onecut2 | 0.261 | msna | -0.118 |
| XLOC-036173 | 0.260 | cd82a | -0.115 |
| tac1 | 0.259 | fabp7a | -0.115 |
| snap25a | 0.255 | tspan7 | -0.115 |
| chodl | 0.253 | COX7A2 (1 of many) | -0.114 |
| spock3 | 0.253 | hmgb2a | -0.114 |
| si:dkey-178k16.1 | 0.250 | CU467822.1 | -0.114 |
| aplp1 | 0.249 | sox19a | -0.113 |
| slc18a3a | 0.247 | her4.1 | -0.113 |
| stmn2b | 0.247 | si:ch73-281n10.2 | -0.113 |
| stx1b | 0.247 | her4.2 | -0.113 |
| tubb2 | 0.246 | atp1a1b | -0.108 |
| SLC35D3 | 0.243 | XLOC-003692 | -0.108 |
| tbx3a | 0.242 | gpm6bb | -0.108 |
| kcnc3a | 0.239 | her12 | -0.108 |
| stmn2a | 0.238 | gfap | -0.107 |
| syn1 | 0.237 | cd63 | -0.107 |
| sv2bb | 0.234 | sb:cb81 | -0.106 |
| syt2a | 0.233 | zgc:165461 | -0.106 |
| rbfox3a | 0.233 | hmgb2b | -0.105 |
| vsnl1a | 0.233 | sox2 | -0.104 |
| cplx2 | 0.231 | pgrmc1 | -0.103 |