Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| onecut1 | 0.263 | id1 | -0.139 |
| lin28a | 0.255 | XLOC-003690 | -0.129 |
| cplx2l | 0.213 | mdka | -0.119 |
| onecut3a | 0.213 | cldn5a | -0.112 |
| si:ch211-215d8.2 | 0.204 | notch3 | -0.109 |
| XLOC-016165 | 0.199 | sox3 | -0.108 |
| tac1 | 0.189 | her15.1 | -0.104 |
| onecut2 | 0.183 | btg2 | -0.101 |
| chodl | 0.180 | sparc | -0.100 |
| mllt11 | 0.178 | XLOC-003689 | -0.096 |
| syt2a | 0.178 | sdc4 | -0.095 |
| jagn1a | 0.177 | CU467822.1 | -0.094 |
| stxbp1a | 0.175 | fabp7a | -0.092 |
| map1b | 0.175 | her4.1 | -0.092 |
| cplx2 | 0.175 | msi1 | -0.091 |
| onecutl | 0.172 | sox19a | -0.090 |
| meis3 | 0.168 | gpm6bb | -0.089 |
| pcsk1nl | 0.168 | her12 | -0.089 |
| sncb | 0.166 | fosab | -0.086 |
| atp6v0cb | 0.165 | her4.2 | -0.086 |
| chrna2a | 0.162 | sb:cb81 | -0.086 |
| stmn2b | 0.161 | msna | -0.085 |
| gng3 | 0.160 | sox2 | -0.085 |
| gfra3 | 0.160 | atp1a1b | -0.084 |
| ywhag2 | 0.160 | vamp3 | -0.084 |
| vamp2 | 0.160 | gfap | -0.084 |
| chrna5 | 0.159 | COX7A2 (1 of many) | -0.084 |
| gng2 | 0.159 | si:ch73-281n10.2 | -0.084 |
| stx1b | 0.158 | XLOC-003692 | -0.083 |
| rbfox1 | 0.158 | zgc:165461 | -0.081 |
| nsg2 | 0.157 | hmgb2a | -0.081 |
| cntn2 | 0.157 | CU634008.1 | -0.080 |
| tuba8l3 | 0.157 | lfng | -0.080 |
| gap43 | 0.157 | notch1b | -0.077 |
| onecut3b | 0.156 | gas1b | -0.077 |