Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| boc | 0.100 | stmn1b | -0.067 |
| gas1b | 0.095 | elavl3 | -0.066 |
| her2 | 0.089 | ckbb | -0.064 |
| dut | 0.087 | tmsb | -0.060 |
| mdka | 0.086 | rtn1a | -0.060 |
| pcna | 0.086 | gpm6ab | -0.059 |
| id1 | 0.085 | gpm6aa | -0.057 |
| mcm7 | 0.083 | gng3 | -0.054 |
| ccnd1 | 0.082 | sncb | -0.054 |
| paics | 0.081 | atp6v0cb | -0.051 |
| XLOC-032526 | 0.080 | rtn1b | -0.050 |
| zgc:56493 | 0.079 | elavl4 | -0.050 |
| si:ch211-212k18.5 | 0.079 | vamp2 | -0.049 |
| rrm1 | 0.079 | rnasekb | -0.047 |
| XLOC-003690 | 0.078 | ywhag2 | -0.047 |
| pax3a | 0.078 | fez1 | -0.047 |
| rrm2 | 0.078 | stmn2a | -0.047 |
| selenoh | 0.078 | si:dkeyp-75h12.5 | -0.046 |
| sox19a | 0.077 | stx1b | -0.045 |
| shmt1 | 0.075 | dpysl3 | -0.045 |
| nutf2l | 0.074 | zgc:65894 | -0.045 |
| sox3 | 0.072 | atp6v1e1b | -0.045 |
| fgfr2 | 0.072 | mllt11 | -0.045 |
| ptgr1 | 0.072 | marcksl1b | -0.045 |
| msi1 | 0.071 | gnao1a | -0.044 |
| rpa2 | 0.071 | stxbp1a | -0.044 |
| sox21b | 0.071 | gap43 | -0.044 |
| fen1 | 0.071 | snap25a | -0.044 |
| mcm4 | 0.070 | ywhah | -0.043 |
| her9 | 0.070 | kdm6bb | -0.042 |
| atic | 0.070 | tmsb2 | -0.042 |
| cad | 0.070 | pvalb1 | -0.042 |
| rnaseh2a | 0.070 | myt1b | -0.042 |
| orc4 | 0.069 | h2afx1 | -0.042 |
| otx2a | 0.069 | tubb5 | -0.042 |