Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ryr1a | 0.374 | hsp90ab1 | -0.252 |
| hhatlb | 0.357 | pabpc1a | -0.237 |
| tpm2 | 0.348 | h3f3d | -0.237 |
| tnnc1b | 0.347 | ran | -0.234 |
| myom1b | 0.346 | h2afvb | -0.233 |
| tnni4b.2 | 0.341 | hnrnpaba | -0.225 |
| pvalb4 | 0.340 | khdrbs1a | -0.225 |
| casq2 | 0.340 | cirbpb | -0.225 |
| myoz2b | 0.339 | si:ch73-1a9.3 | -0.218 |
| mustn1b | 0.331 | hmgb2b | -0.214 |
| LO018250.1 | 0.329 | snrpf | -0.211 |
| prx | 0.327 | setb | -0.210 |
| sptb | 0.324 | hnrnpabb | -0.210 |
| CU633479.2 | 0.323 | naca | -0.207 |
| nme2b.2 | 0.320 | eef1a1l1 | -0.205 |
| tnnt2d | 0.317 | hnrnpa0b | -0.201 |
| mybpc3 | 0.316 | cirbpa | -0.201 |
| BX248497.1 | 0.314 | si:ch211-222l21.1 | -0.200 |
| smyhc1 | 0.314 | cfl1 | -0.198 |
| si:ch211-266g18.10 | 0.311 | hmgn2 | -0.198 |
| myl13 | 0.310 | hmga1a | -0.196 |
| tnni1c | 0.307 | syncrip | -0.196 |
| xirp2a | 0.306 | snrpb | -0.196 |
| pmp22b | 0.306 | cbx3a | -0.195 |
| rtn1a | 0.305 | snrpd1 | -0.195 |
| smpx | 0.303 | si:ch73-281n10.2 | -0.192 |
| eno3 | 0.303 | ptmab | -0.191 |
| pygmb | 0.303 | snu13b | -0.189 |
| nrap | 0.300 | hmgb2a | -0.189 |
| kcnmb2 | 0.300 | npm1a | -0.189 |
| rnf207b | 0.300 | ddx39ab | -0.185 |
| zgc:86709 | 0.299 | snrpd2 | -0.185 |
| gapdh | 0.298 | ubc | -0.185 |
| tnnt2e | 0.298 | actb2 | -0.184 |
| tpm3 | 0.298 | ncl | -0.184 |