| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tcf21 | 0.134 | cdh11 | -0.054 |
| tmem98 | 0.130 | cnmd | -0.050 |
| rdh10a | 0.122 | sox9a | -0.046 |
| hoxc1a | 0.115 | mab21l2 | -0.044 |
| hoxc13a | 0.113 | col9a1a | -0.044 |
| isl2b | 0.111 | col2a1a | -0.043 |
| fgl1 | 0.111 | fibina | -0.043 |
| hoxc13b | 0.108 | foxc1b | -0.043 |
| dmrt2a | 0.107 | fgfbp2b | -0.042 |
| hoxb8a | 0.107 | ebf1a | -0.041 |
| hoxb6b | 0.100 | rarga | -0.041 |
| ntn1a | 0.099 | phlda3 | -0.041 |
| hoxb13a | 0.099 | tnc | -0.040 |
| tnxbb | 0.098 | matn4 | -0.040 |
| zmp:0000000846 | 0.097 | foxc1a | -0.040 |
| LOC100535130 | 0.096 | col9a2 | -0.039 |
| and1 | 0.096 | col9a3 | -0.038 |
| hlx1 | 0.094 | six1a | -0.038 |
| hoxc3a | 0.094 | dlx5a | -0.038 |
| tbx3b | 0.094 | foxd1 | -0.037 |
| vwde | 0.089 | tgfbi | -0.037 |
| rbpms2b | 0.088 | CU929237.1 | -0.037 |
| sh3bgrl2 | 0.087 | fxyd1 | -0.037 |
| csf1b | 0.082 | sox5 | -0.036 |
| aldh1a2 | 0.081 | cldn11a | -0.034 |
| gfra1a | 0.080 | prrx1b | -0.034 |
| hoxb8b | 0.079 | VIT | -0.033 |
| LOC108181455 | 0.076 | foxd2 | -0.032 |
| lta | 0.075 | dlx2a | -0.031 |
| meis3 | 0.075 | hapln1a | -0.031 |
| pax7a | 0.073 | gdf10a | -0.031 |
| wnt6b | 0.073 | cspg4 | -0.031 |
| rrad | 0.073 | fli1a | -0.031 |
| foxf1 | 0.072 | hand2 | -0.031 |
| hhla2a.1 | 0.071 | cyp26b1 | -0.030 |