| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.340 | krtt1c19e | -0.229 |
| shhb | 0.315 | krt5 | -0.216 |
| foxa2 | 0.268 | si:dkey-16p21.8 | -0.216 |
| si:busm1-71b9.3 | 0.232 | zgc:136930 | -0.212 |
| fxyd1 | 0.229 | cyt1 | -0.208 |
| pitx1 | 0.227 | lgals1l1 | -0.206 |
| fabp2 | 0.221 | si:dkey-183i3.5 | -0.202 |
| sox2 | 0.215 | col1a1a | -0.201 |
| sostdc1a | 0.207 | col1a1b | -0.199 |
| anos1a | 0.207 | col1a2 | -0.197 |
| fgfrl1b | 0.204 | cyt1l | -0.192 |
| jun | 0.203 | rbp4 | -0.191 |
| apoeb | 0.202 | si:dkey-33c14.3 | -0.187 |
| ptch2 | 0.198 | wu:fa03e10 | -0.186 |
| id3 | 0.197 | kera | -0.181 |
| pitx2 | 0.195 | col11a1a | -0.181 |
| cd9b | 0.195 | col17a1a | -0.181 |
| vwa1 | 0.194 | col2a1b | -0.174 |
| dact2 | 0.193 | postnb | -0.168 |
| si:dkey-208c12.2 | 0.190 | col14a1b | -0.168 |
| CT030188.1 | 0.189 | aep1 | -0.166 |
| ociad2 | 0.189 | CABZ01044281.1 | -0.158 |
| tbx2b | 0.189 | krt4 | -0.148 |
| fgfrl1a | 0.187 | DSG2 | -0.147 |
| rpz5 | 0.187 | krt91 | -0.144 |
| krt18a.1 | 0.186 | itgb1b.2 | -0.140 |
| fzd5 | 0.180 | col5a3b | -0.137 |
| BX908782.3 | 0.178 | si:ch211-166a6.5 | -0.137 |
| apln | 0.176 | si:ch211-76l23.4 | -0.136 |
| hoxb5a | 0.173 | itgb3a | -0.131 |
| kitlga | 0.172 | itgb4 | -0.130 |
| bcam | 0.170 | dcn | -0.127 |
| inka1a | 0.169 | ecrg4b | -0.127 |
| fthl27 | 0.169 | zgc:175088 | -0.127 |
| sox19b | 0.169 | CR381618.1 | -0.122 |