| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| id1 | 0.321 | elavl3 | -0.306 |
| her9 | 0.291 | gng3 | -0.267 |
| cldn5a | 0.278 | myt1b | -0.262 |
| si:ch211-66e2.5 | 0.269 | elavl4 | -0.258 |
| mdka | 0.258 | stxbp1a | -0.255 |
| igfbp7 | 0.256 | ptmaa | -0.253 |
| shha | 0.250 | sncb | -0.251 |
| tpm4a | 0.249 | stx1b | -0.250 |
| msx1b | 0.245 | stmn1b | -0.244 |
| krt18a.1 | 0.244 | snap25a | -0.243 |
| hepacama | 0.244 | vamp2 | -0.240 |
| zic2a | 0.242 | tmsb | -0.238 |
| sox2 | 0.237 | rtn1a | -0.235 |
| zfp36l1a | 0.237 | rtn1b | -0.233 |
| XLOC-003690 | 0.236 | syt2a | -0.232 |
| vasna | 0.233 | cplx2 | -0.228 |
| gdf10a | 0.233 | gng2 | -0.223 |
| sparc | 0.233 | atp6v0cb | -0.223 |
| fzd10 | 0.232 | ywhah | -0.222 |
| pmp22a | 0.232 | ywhag2 | -0.220 |
| ptn | 0.232 | stmn2a | -0.220 |
| sdcbp2 | 0.231 | nsg2 | -0.219 |
| wnt11r | 0.229 | tmem59l | -0.214 |
| si:dkey-34d22.1 | 0.228 | rbfox1 | -0.213 |
| wnt4a | 0.227 | onecut1 | -0.210 |
| zic5 | 0.225 | cplx2l | -0.209 |
| crtap | 0.225 | gap43 | -0.208 |
| cnn2 | 0.225 | aplp1 | -0.208 |
| vamp3 | 0.225 | jagn1a | -0.204 |
| cd63 | 0.223 | si:dkey-276j7.1 | -0.202 |
| slit2 | 0.222 | sncgb | -0.199 |
| rfx4 | 0.219 | id4 | -0.199 |
| si:dkey-7j14.6 | 0.217 | zgc:65894 | -0.198 |
| cdon | 0.216 | map1aa | -0.198 |
| lmx1bb | 0.215 | calm1a | -0.196 |