| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mnx1 | 0.333 | hbbe1.3 | -0.086 |
| hoxb10a | 0.322 | hbae1.1 | -0.084 |
| npas4l | 0.284 | hbae3 | -0.083 |
| BX469925.3 | 0.255 | prdx2 | -0.080 |
| lsp1 | 0.251 | hbbe2 | -0.080 |
| wu:fb97g03 | 0.246 | hbbe1.1 | -0.077 |
| hoxc3a | 0.243 | hbae1.3 | -0.077 |
| fgf10b | 0.232 | blvrb | -0.076 |
| BX001014.2 | 0.230 | cahz | -0.074 |
| hoxb7a | 0.228 | tspo | -0.071 |
| apela | 0.224 | hbbe1.2 | -0.068 |
| flrt3 | 0.215 | hemgn | -0.067 |
| morc3b | 0.214 | slc4a1a | -0.065 |
| fgfrl1b | 0.214 | si:ch211-250g4.3 | -0.063 |
| spp1 | 0.206 | pvalb1 | -0.063 |
| dact2 | 0.206 | creg1 | -0.062 |
| lin28a | 0.206 | pvalb2 | -0.062 |
| fbn2a.1 | 0.205 | nt5c2l1 | -0.061 |
| fbln1 | 0.203 | alas2 | -0.059 |
| cx43.4 | 0.201 | gpx1a | -0.057 |
| tbxtb | 0.192 | epb41b | -0.056 |
| cdx4 | 0.192 | nmt1b | -0.055 |
| BX005254.3 | 0.189 | plac8l1 | -0.055 |
| hspb1 | 0.189 | zgc:163057 | -0.054 |
| ripply2 | 0.186 | tmod4 | -0.053 |
| tal1 | 0.184 | si:ch211-207c6.2 | -0.052 |
| tspan7 | 0.184 | tmem14ca | -0.047 |
| pltp | 0.182 | actc1b | -0.047 |
| gbx2 | 0.181 | selenoj | -0.047 |
| ndnf | 0.181 | si:ch211-227m13.1 | -0.047 |
| wnt2bb | 0.181 | add2 | -0.046 |
| isl2a | 0.180 | klf1 | -0.044 |
| oc90 | 0.178 | mylpfa | -0.044 |
| CABZ01075068.1 | 0.174 | bloc1s6 | -0.043 |
| gdf6b | 0.173 | fth1a | -0.043 |