Usher syndrome 1Gb (autosomal recessive)
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-026673 | 0.356 | rpl18a | -0.060 |
| acanb | 0.305 | rplp2l | -0.055 |
| si:ch211-238e22.2 | 0.292 | ybx1 | -0.053 |
| si:ch211-226h8.4 | 0.265 | marcksl1a | -0.050 |
| LOC101884314 | 0.249 | rpl39 | -0.049 |
| rinl | 0.235 | rpl29 | -0.046 |
| FP074874.2 | 0.229 | rps23 | -0.043 |
| foxd5 | 0.223 | rps28 | -0.042 |
| or133-2 | 0.205 | brd2a | -0.039 |
| BX640520.1 | 0.200 | hsp90ab1 | -0.039 |
| CU914550.1 | 0.195 | rpl32 | -0.039 |
| dlg4b | 0.188 | rps4x | -0.037 |
| fam155b | 0.186 | hdac1 | -0.036 |
| vsig10l | 0.172 | rps27a | -0.036 |
| phf13 | 0.167 | rpl36 | -0.035 |
| onecutl | 0.166 | hspa8 | -0.035 |
| LOC103909945 | 0.165 | rps20 | -0.035 |
| BX120005.1 | 0.165 | rps24 | -0.034 |
| pcdh18a | 0.161 | pkig | -0.034 |
| gpr155b | 0.159 | kdm1a | -0.034 |
| or103-2 | 0.158 | h2afvb | -0.034 |
| CR388047.1 | 0.157 | cldni | -0.034 |
| BX890548.1 | 0.155 | txndc9 | -0.034 |
| LOC101882181 | 0.154 | BX284638.1 | -0.034 |
| LOC110439303 | 0.154 | naa40 | -0.034 |
| or126-4 | 0.154 | tuba8l3 | -0.033 |
| pde6c | 0.152 | rpl4 | -0.033 |
| wwox | 0.152 | hmgb3a | -0.033 |
| si:rp71-45g20.4 | 0.149 | serp1 | -0.033 |
| mtus1b | 0.148 | gng13a | -0.033 |
| CR936249.1 | 0.146 | rps21 | -0.033 |
| LOC101885161 | 0.146 | lsm3 | -0.033 |
| cox5b2 | 0.145 | hnrnpa0a | -0.033 |
| asmt | 0.144 | si:dkey-248g15.3 | -0.032 |
| si:dkey-33c14.6 | 0.143 | crip1 | -0.032 |