Usher syndrome 1Gb (autosomal recessive)
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tac4 | 0.355 | h2afvb | -0.061 |
| BX323060.1 | 0.275 | marcksl1b | -0.053 |
| AL928920.2 | 0.237 | hspb1 | -0.049 |
| CABZ01076744.1 | 0.228 | stm | -0.049 |
| cfhl1 | 0.227 | si:ch211-222l21.1 | -0.048 |
| obsl1a | 0.216 | rpl27 | -0.048 |
| atg4db | 0.197 | hmga1a | -0.048 |
| c1qtnf2 | 0.195 | rps15 | -0.047 |
| pcdh2ab7 | 0.177 | si:ch73-1a9.3 | -0.045 |
| pea15 | 0.177 | rps12 | -0.045 |
| LO017816.1 | 0.177 | CR383676.1 | -0.043 |
| BX537166.1 | 0.176 | rplp1 | -0.043 |
| trim35-24 | 0.171 | pou5f3 | -0.043 |
| BX321912.1 | 0.161 | polr3gla | -0.042 |
| angptl2a | 0.159 | tcea1 | -0.042 |
| itpripl2 | 0.157 | hnrnpa0b | -0.041 |
| plch2b | 0.156 | si:dkey-151g10.6 | -0.039 |
| BX548062.1 | 0.154 | hmgn6 | -0.038 |
| ankrd52b | 0.150 | si:dkey-56m19.5 | -0.038 |
| fut7 | 0.143 | hmgb2a | -0.037 |
| BX537280.1 | 0.142 | apoeb | -0.037 |
| col5a3b | 0.139 | aldob | -0.036 |
| zp2l2 | 0.138 | ybx1 | -0.036 |
| lrrn2 | 0.137 | khdrbs1a | -0.036 |
| LOC108190497 | 0.134 | sfpq | -0.035 |
| plac8.2 | 0.133 | rps2 | -0.035 |
| bmp7b | 0.133 | tuba8l4 | -0.034 |
| LOC101882135 | 0.132 | dynll1 | -0.033 |
| CLIP4 | 0.132 | anp32a | -0.033 |
| apoa4b.2 | 0.131 | rpl35a | -0.033 |
| cbsa | 0.129 | rps24 | -0.033 |
| LOC101886621 | 0.125 | rps19 | -0.033 |
| mhc1zda | 0.123 | rps27a | -0.033 |
| BX537110.1 | 0.121 | ppp2cb | -0.033 |
| BX649266.2 | 0.121 | rps28 | -0.033 |