| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox3 | 0.086 | tbxta | -0.095 |
| LOC101885477 | 0.078 | wnt11f2 | -0.081 |
| shisa2a | 0.076 | FP102169.1 | -0.074 |
| zic2b | 0.072 | NC-002333.4 | -0.073 |
| cxcr4b | 0.070 | msgn1 | -0.068 |
| mplkip | 0.066 | sebox | -0.067 |
| gpd1b | 0.065 | gata5 | -0.066 |
| sox19a | 0.065 | mespab | -0.065 |
| serpine2 | 0.063 | osr1 | -0.064 |
| kars | 0.061 | lhx1a | -0.064 |
| cited4b | 0.058 | lft1 | -0.062 |
| kmt5ab | 0.058 | BX927327.1 | -0.062 |
| anp32a | 0.058 | cyp27c1 | -0.062 |
| thy1 | 0.058 | ndr2 | -0.060 |
| sept12 | 0.058 | dkk1b | -0.060 |
| dnajb1b | 0.057 | cdx4 | -0.058 |
| cxcr4a | 0.056 | wu:fb97g03 | -0.058 |
| sox11a | 0.056 | si:dkey-261j4.5 | -0.057 |
| atp1b1a | 0.055 | tbx16 | -0.057 |
| nova1 | 0.055 | fgf8a | -0.055 |
| pfkfb4b | 0.055 | sp5a | -0.054 |
| pold3 | 0.055 | efnb2b | -0.054 |
| id1 | 0.054 | foxa | -0.053 |
| mrto4 | 0.054 | eve1 | -0.053 |
| hirip3 | 0.053 | efna1a | -0.051 |
| mt-nd2 | 0.052 | zic2a | -0.051 |
| limd1b | 0.052 | flrt3 | -0.051 |
| zgc:112332 | 0.052 | wnt5b | -0.050 |
| coa3a | 0.052 | mespaa | -0.050 |
| foxd5 | 0.052 | im:7138239 | -0.050 |
| alcamb | 0.051 | gata6 | -0.050 |
| LOC108190036 | 0.051 | nkd1 | -0.049 |
| ranbp3b | 0.050 | ism1 | -0.049 |
| LOC101886786 | 0.050 | drl | -0.048 |
| prdm6 | 0.050 | fgf17 | -0.048 |