| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx2a | 0.178 | foxc1b | -0.086 |
| AL954322.2 | 0.173 | cnmd | -0.083 |
| tbx2b | 0.172 | foxc1a | -0.079 |
| tbx5a | 0.136 | col2a1a | -0.066 |
| msx1b | 0.135 | col9a2 | -0.065 |
| ttc36 | 0.129 | fxyd1 | -0.065 |
| prrx1b | 0.125 | foxd1 | -0.063 |
| ifitm1 | 0.123 | cthrc1a | -0.061 |
| rgs5a | 0.122 | col9a3 | -0.060 |
| msx3 | 0.117 | col9a1a | -0.059 |
| hoxd12a | 0.116 | tgfbi | -0.058 |
| shhb | 0.115 | fgfbp2b | -0.056 |
| shox2 | 0.114 | foxp4 | -0.055 |
| zgc:56585 | 0.112 | foxd2 | -0.054 |
| alx4a | 0.111 | col11a2 | -0.054 |
| lhx8a | 0.111 | tnn | -0.053 |
| tmeff2a | 0.108 | matn4 | -0.048 |
| col6a1 | 0.107 | zgc:162612 | -0.048 |
| col6a4a | 0.107 | myl9a | -0.048 |
| rhag | 0.105 | epyc | -0.048 |
| fam69c | 0.105 | hoxa2b | -0.046 |
| col6a2 | 0.103 | fibina | -0.046 |
| rspo4 | 0.100 | ucmab | -0.046 |
| smad9 | 0.099 | otos | -0.044 |
| mab21l2 | 0.098 | si:ch73-86n18.1 | -0.043 |
| fstb | 0.097 | her9 | -0.043 |
| adamts15a | 0.097 | si:ch211-156j16.1 | -0.042 |
| tnfaip6 | 0.090 | sult6b1 | -0.041 |
| fbln1 | 0.089 | tfpia | -0.041 |
| fbn2a.1 | 0.088 | foxf2a | -0.040 |
| bambib | 0.088 | si:dkey-6n6.1 | -0.039 |
| hoxd13a | 0.088 | sox9a | -0.039 |
| twist1b | 0.087 | grem2b | -0.039 |
| ms4a17a.7 | 0.086 | ednraa | -0.039 |
| asip1 | 0.084 | prss35 | -0.038 |