| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx2b | 0.238 | cnmd | -0.130 |
| AL954322.2 | 0.183 | col2a1a | -0.117 |
| tbx3a | 0.178 | col9a2 | -0.113 |
| prrx1b | 0.166 | col9a3 | -0.110 |
| msx3 | 0.149 | col9a1a | -0.110 |
| rhag | 0.137 | foxc1b | -0.102 |
| gata5 | 0.130 | fgfbp2b | -0.101 |
| fbn2a.1 | 0.130 | col11a2 | -0.094 |
| col6a4a | 0.129 | matn4 | -0.089 |
| fbln1 | 0.128 | sox9a | -0.079 |
| pitx1 | 0.124 | tgfbi | -0.078 |
| col6a1 | 0.121 | tnn | -0.078 |
| alx4a | 0.118 | epyc | -0.077 |
| lhx8a | 0.110 | otos | -0.077 |
| smad9 | 0.110 | cthrc1a | -0.077 |
| lhx6 | 0.109 | fxyd1 | -0.072 |
| msx1b | 0.107 | foxc1a | -0.072 |
| alcamb | 0.105 | col11a1a | -0.071 |
| adamts15a | 0.105 | wfdc2 | -0.071 |
| cdon | 0.102 | ucmab | -0.070 |
| col6a2 | 0.102 | matn1 | -0.069 |
| XLOC-028299 | 0.102 | si:dkey-6n6.1 | -0.065 |
| fam69c | 0.097 | mia | -0.065 |
| XLOC-034214 | 0.097 | acana | -0.064 |
| pitx2 | 0.094 | AL929222.2 | -0.063 |
| fzd7a | 0.094 | VIT | -0.063 |
| hand2 | 0.094 | col8a2 | -0.063 |
| entpd1 | 0.094 | snorc | -0.060 |
| lbx2 | 0.093 | nog3 | -0.060 |
| col6a3 | 0.092 | col2a1b | -0.060 |
| bambib | 0.091 | sult6b1 | -0.058 |
| vox | 0.090 | tpm1 | -0.058 |
| rgs5a | 0.090 | zic2a | -0.057 |
| wnt2bb | 0.089 | wwp2 | -0.057 |
| rspo4 | 0.089 | wisp3 | -0.057 |