Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| AL954322.2 | 0.079 | XLOC-003689 | -0.015 |
| tbx2a | 0.079 | nova2 | -0.013 |
| CR318624.2 | 0.063 | XLOC-003692 | -0.013 |
| CT737162.3 | 0.059 | abhd6a | -0.013 |
| tbx2b | 0.057 | gfap | -0.012 |
| fhl2b | 0.056 | her2 | -0.012 |
| si:ch73-89b15.3 | 0.055 | si:ch73-21g5.7 | -0.012 |
| si:ch211-256m1.8 | 0.054 | fabp3 | -0.011 |
| akap12a | 0.053 | her12 | -0.011 |
| gpnmb | 0.052 | si:dkey-56m19.5 | -0.011 |
| alx4a | 0.051 | sox19a | -0.011 |
| si:ch211-38m6.6 | 0.051 | sox3 | -0.011 |
| lypc | 0.050 | tuba1a | -0.011 |
| tmem179b | 0.049 | her15.1 | -0.011 |
| apoda.1 | 0.048 | dla | -0.010 |
| unm-sa821 | 0.048 | elavl3 | -0.010 |
| ltk | 0.047 | LOC798783 | -0.010 |
| alx4b | 0.046 | plp1a | -0.010 |
| hsf5 | 0.046 | si:ch211-57n23.4 | -0.010 |
| zgc:110789 | 0.045 | tmsb | -0.010 |
| otog | 0.044 | her4.2 | -0.010 |
| defbl1 | 0.043 | CABZ01075068.1 | -0.009 |
| si:dkey-197i20.6 | 0.042 | irx3b | -0.009 |
| si:ch211-243a20.3 | 0.042 | mir219-3 | -0.009 |
| ednrba | 0.040 | pou3f1 | -0.009 |
| rab38b | 0.040 | pou3f3a | -0.009 |
| prrx1b | 0.040 | tuba1c | -0.009 |
| BX324132.3 | 0.039 | XLOC-003690 | -0.009 |
| emp3b | 0.039 | CU634008.1 | -0.009 |
| otomp | 0.039 | dlb | -0.008 |
| LOC100331291 | 0.038 | dld | -0.008 |
| zpld1a | 0.038 | ebf2 | -0.008 |
| bambia | 0.037 | en2b | -0.008 |
| LOC103909099 | 0.037 | her13 | -0.008 |
| clec3ba | 0.036 | her4.4 | -0.008 |