| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r | 
| nanog | 0.180 | pvalb2 | -0.051 | 
| h1m | 0.176 | pvalb1 | -0.050 | 
| cldnd | 0.171 | actc1b | -0.048 | 
| ccna1 | 0.169 | elavl3 | -0.047 | 
| zgc:173742 | 0.166 | hbbe1.3 | -0.045 | 
| acp5a | 0.159 | rtn1a | -0.045 | 
| si:dkey-68o6.5 | 0.155 | hbae3 | -0.044 | 
| zgc:100951 | 0.151 | myt1b | -0.043 | 
| si:dkeyp-114g9.1 | 0.144 | scrt2 | -0.043 | 
| zgc:113424 | 0.143 | hbae1.1 | -0.041 | 
| zgc:77118 | 0.141 | hbbe1.1 | -0.040 | 
| nnr | 0.140 | mylpfa | -0.038 | 
| map1lc3c | 0.139 | hbbe2 | -0.037 | 
| cth1 | 0.138 | tnni2a.4 | -0.037 | 
| h2af1al | 0.137 | tnnt3b | -0.036 | 
| avd | 0.135 | dlb | -0.035 | 
| pabpc1l | 0.132 | hbae1.3 | -0.035 | 
| si:ch211-132b12.8 | 0.131 | nova2 | -0.035 | 
| gdf3 | 0.130 | hbbe1.2 | -0.034 | 
| wee2 | 0.130 | mylz3 | -0.034 | 
| zgc:56699 | 0.129 | si:ch211-250g4.3 | -0.034 | 
| pabpn1l | 0.126 | myhz1.1 | -0.034 | 
| rcc1 | 0.125 | cyt1 | -0.033 | 
| si:ch211-173m16.2 | 0.125 | gpm6aa | -0.033 | 
| si:ch1073-80i24.3 | 0.124 | myt1a | -0.033 | 
| ccna2 | 0.123 | ckma | -0.032 | 
| asb11 | 0.122 | cyt1l | -0.032 | 
| si:dkey-228b2.6 | 0.122 | tpma | -0.032 | 
| si:rp71-45k5.2 | 0.122 | ebf2 | -0.031 | 
| LOC101885477 | 0.121 | stmn1b | -0.031 | 
| lsm14b | 0.119 | LOC100537384 | -0.031 | 
| mcm6l | 0.119 | krtt1c19e | -0.030 | 
| mkrn4 | 0.119 | mylpfb | -0.030 | 
| larp6b | 0.117 | ndrg4 | -0.030 | 
| si:ch73-303b9.1 | 0.117 | nhlh2 | -0.030 |