| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| npas4l | 0.219 | hbae1.1 | -0.126 |
| cx43.4 | 0.190 | hbbe1.3 | -0.121 |
| cdx4 | 0.178 | hbae3 | -0.119 |
| mnx1 | 0.177 | hbae1.3 | -0.113 |
| lsp1 | 0.175 | hbbe2 | -0.111 |
| dact2 | 0.174 | hbbe1.1 | -0.111 |
| spry4 | 0.173 | prdx2 | -0.110 |
| hoxb10a | 0.172 | cahz | -0.105 |
| apela | 0.169 | blvrb | -0.102 |
| hspb1 | 0.166 | hemgn | -0.101 |
| etv2 | 0.166 | hbbe1.2 | -0.098 |
| XLOC-022032 | 0.164 | tspo | -0.093 |
| lin28a | 0.162 | alas2 | -0.092 |
| vox | 0.161 | slc4a1a | -0.091 |
| hoxb7a | 0.157 | nt5c2l1 | -0.087 |
| hmga1a | 0.156 | creg1 | -0.086 |
| chd7 | 0.153 | zgc:163057 | -0.083 |
| nucks1a | 0.151 | epb41b | -0.083 |
| tspan7 | 0.150 | si:ch211-250g4.3 | -0.083 |
| si:ch73-281n10.2 | 0.150 | si:ch211-207c6.2 | -0.078 |
| BX005254.3 | 0.148 | nmt1b | -0.076 |
| fbln1 | 0.147 | plac8l1 | -0.075 |
| fgf10b | 0.147 | tmem14ca | -0.074 |
| khdrbs1a | 0.147 | tmod4 | -0.073 |
| ctnnb1 | 0.146 | gpx1a | -0.070 |
| syncrip | 0.145 | fth1a | -0.068 |
| ilf3b | 0.145 | hbae5 | -0.067 |
| ripply2 | 0.144 | sptb | -0.066 |
| hnrnpa0b | 0.142 | tfr1a | -0.065 |
| tbxtb | 0.142 | selenoj | -0.064 |
| hnrnpaba | 0.142 | hbbe3 | -0.064 |
| nid2a | 0.140 | rfesd | -0.062 |
| vcana | 0.140 | hdr | -0.062 |
| marcksb | 0.138 | klf1 | -0.062 |
| hoxc3a | 0.137 | si:ch211-227m13.1 | -0.061 |