| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc6a5 | 0.564 | id1 | -0.189 |
| slc32a1 | 0.528 | XLOC-003690 | -0.188 |
| pax2a | 0.427 | msna | -0.164 |
| cacna2d3 | 0.416 | cldn5a | -0.161 |
| lhx1a | 0.415 | mdka | -0.161 |
| nkx1.2lb | 0.390 | hmgb2a | -0.160 |
| znf385c | 0.378 | her15.1 | -0.154 |
| pax8 | 0.371 | sox3 | -0.152 |
| stxbp1a | 0.343 | notch3 | -0.150 |
| sncgb | 0.342 | XLOC-003689 | -0.150 |
| stx1b | 0.328 | sdc4 | -0.142 |
| lhx5 | 0.326 | vamp3 | -0.141 |
| LOC100330246 | 0.316 | btg2 | -0.140 |
| nrxn1a | 0.302 | tuba8l4 | -0.137 |
| nrxn3a | 0.295 | msi1 | -0.137 |
| cplx2l | 0.289 | sparc | -0.135 |
| en1b | 0.285 | COX7A2 (1 of many) | -0.130 |
| rbfox3a | 0.284 | her4.1 | -0.130 |
| pax2b | 0.277 | XLOC-003692 | -0.127 |
| kcnc3a | 0.273 | sox19a | -0.127 |
| snap25a | 0.270 | tubb4b | -0.126 |
| rbfox1 | 0.270 | her4.2 | -0.126 |
| syt2a | 0.270 | cd82a | -0.125 |
| nsg2 | 0.269 | sb:cb81 | -0.123 |
| cplx2 | 0.267 | her12 | -0.123 |
| vamp2 | 0.267 | tspan7 | -0.122 |
| mab21l2 | 0.261 | fabp7a | -0.122 |
| atp6v0cb | 0.260 | rplp1 | -0.121 |
| sypb | 0.258 | si:ch211-286b5.5 | -0.121 |
| grin1a | 0.256 | cd81a | -0.121 |
| nrxn3b | 0.255 | marcksl1a | -0.121 |
| cbfa2t3 | 0.253 | si:ch73-281n10.2 | -0.120 |
| eno2 | 0.249 | si:dkey-151g10.6 | -0.120 |
| spock1 | 0.248 | fosab | -0.119 |
| vsnl1a | 0.245 | actb2 | -0.119 |