| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.639 | cyt1l | -0.259 |
| si:busm1-71b9.3 | 0.407 | cyt1 | -0.250 |
| pitx1 | 0.403 | krtt1c19e | -0.198 |
| foxa2 | 0.401 | zgc:175088 | -0.185 |
| ptch2 | 0.383 | si:dkey-16p21.8 | -0.184 |
| pitx2 | 0.380 | col2a1b | -0.183 |
| sox2 | 0.372 | rbp4 | -0.180 |
| fxyd1 | 0.342 | krt5 | -0.178 |
| si:dkey-208c12.2 | 0.339 | lgals1l1 | -0.178 |
| anos1a | 0.337 | col5a1 | -0.167 |
| sox19b | 0.337 | aep1 | -0.166 |
| inhbaa | 0.327 | tfap2a | -0.165 |
| fgfrl1b | 0.315 | zgc:136930 | -0.159 |
| wnt11r | 0.315 | ptgdsb.1 | -0.157 |
| sema3bl | 0.310 | wu:fa03e10 | -0.153 |
| ociad2 | 0.305 | kera | -0.152 |
| slco2b1 | 0.302 | si:dkey-183i3.5 | -0.150 |
| igfbp7 | 0.292 | thy1 | -0.148 |
| c1qtnf12 | 0.287 | DSG2 | -0.144 |
| sostdc1a | 0.277 | si:dkey-33c14.3 | -0.140 |
| foxe1 | 0.274 | ecrg4b | -0.136 |
| ephb4a | 0.273 | col1a2 | -0.135 |
| dmrt2b | 0.266 | gas1a | -0.134 |
| crygm2d20 | 0.265 | igfbp2a | -0.133 |
| ccl27a | 0.256 | col17a1a | -0.131 |
| barx1 | 0.245 | col1a1b | -0.128 |
| il13ra2 | 0.245 | col11a1a | -0.128 |
| icn | 0.244 | rhbg | -0.125 |
| rpz5 | 0.243 | pleca | -0.124 |
| nkx3.3 | 0.240 | si:ch211-166a6.5 | -0.124 |
| spon1b | 0.236 | col14a1b | -0.122 |
| si:ch73-23l24.1 | 0.233 | krt4 | -0.122 |
| kitlga | 0.225 | hdlbpa | -0.121 |
| vwa1 | 0.224 | col1a1a | -0.121 |
| met | 0.222 | pon3.2 | -0.120 |