| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.174 | sox3 | -0.125 |
| tbxta | 0.169 | cited4b | -0.094 |
| lhx1a | 0.168 | id1 | -0.088 |
| mespab | 0.167 | cxcr4b | -0.084 |
| efnb2b | 0.164 | sox19a | -0.084 |
| wnt11f2 | 0.159 | glulb | -0.076 |
| gata5 | 0.158 | ccna1 | -0.076 |
| osr1 | 0.151 | cxcr4a | -0.072 |
| p4ha2 | 0.145 | blf | -0.070 |
| dusp4 | 0.145 | inka1a | -0.070 |
| mespaa | 0.144 | shisa2a | -0.063 |
| dkk1b | 0.142 | asb11 | -0.063 |
| FP102169.1 | 0.137 | zgc:173742 | -0.062 |
| zic2a | 0.136 | gtf2e2 | -0.061 |
| gata6 | 0.134 | stk35l | -0.059 |
| wnt5b | 0.133 | zgc:100951 | -0.057 |
| BX927327.1 | 0.132 | h1m | -0.056 |
| sp5a | 0.131 | ap1s3b | -0.055 |
| efna1a | 0.127 | ctsla | -0.055 |
| wu:fb97g03 | 0.126 | patl1 | -0.055 |
| lft1 | 0.126 | rcor1 | -0.055 |
| cyp27c1 | 0.125 | ska2 | -0.055 |
| ndr2 | 0.125 | nsd2 | -0.055 |
| im:7138239 | 0.123 | sb:cb81 | -0.054 |
| fscn1a | 0.121 | gtf2a1 | -0.054 |
| hes6 | 0.119 | reep2 | -0.053 |
| si:ch211-105c13.3 | 0.119 | mycn | -0.053 |
| aplnrb | 0.118 | nasp | -0.052 |
| si:dkey-21h14.3 | 0.118 | nanog | -0.052 |
| ism1 | 0.118 | si:rp71-45k5.2 | -0.052 |
| XLOC-025426 | 0.113 | ehmt1b | -0.051 |
| lhx1b | 0.111 | tent5ba | -0.051 |
| LOC110438259 | 0.111 | mknk2a | -0.051 |
| tpbga | 0.109 | srpk1a | -0.050 |
| pitx2 | 0.109 | homeza | -0.050 |