| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ripply3 | 0.209 | col1a2 | -0.095 |
| meis3 | 0.195 | col1a1a | -0.091 |
| nkx2.7 | 0.155 | bhmt | -0.091 |
| zbtb16b | 0.152 | col5a1 | -0.090 |
| CABZ01075068.1 | 0.149 | sparc | -0.086 |
| mycn | 0.147 | col2a1b | -0.085 |
| nkx2.5 | 0.137 | dcn | -0.078 |
| hs3st3b1a | 0.130 | col11a1b | -0.074 |
| hoxb1b | 0.130 | fmoda | -0.069 |
| npm1a | 0.129 | col9a1a | -0.067 |
| zgc:56699 | 0.127 | col9a2 | -0.066 |
| isl2b | 0.127 | matn4 | -0.066 |
| dkc1 | 0.119 | cnmd | -0.066 |
| pdgfab | 0.117 | col2a1a | -0.066 |
| snu13b | 0.115 | rbp4 | -0.065 |
| nop58 | 0.113 | postnb | -0.064 |
| nhp2 | 0.112 | col9a3 | -0.064 |
| apela | 0.112 | fibina | -0.063 |
| paics | 0.109 | serpinf1 | -0.062 |
| ednrab | 0.109 | cthrc1a | -0.062 |
| hoxc1a | 0.109 | col1a1b | -0.061 |
| apex1 | 0.107 | cdh11 | -0.061 |
| rxrga | 0.106 | fgfbp2b | -0.060 |
| ptges3b | 0.106 | foxc1b | -0.059 |
| nop56 | 0.106 | pvalb1 | -0.059 |
| snrpb | 0.106 | zgc:162730 | -0.059 |
| mcm7 | 0.105 | col11a1a | -0.059 |
| hoxb3a | 0.105 | tnn | -0.058 |
| hoxa3a | 0.105 | wfdc2 | -0.057 |
| ncl | 0.105 | tgfbi | -0.055 |
| hmga1a | 0.104 | pvalb2 | -0.055 |
| sall4 | 0.104 | pdgfrl | -0.055 |
| seta | 0.101 | fstl1b | -0.054 |
| cdkn2aipnl | 0.100 | mab21l2 | -0.054 |
| snrpd1 | 0.100 | actc1b | -0.053 |