| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx1a | 0.277 | sox3 | -0.233 |
| efnb2b | 0.262 | id1 | -0.182 |
| FP102169.1 | 0.248 | sox19a | -0.158 |
| gata6 | 0.246 | cxcr4b | -0.151 |
| gata5 | 0.242 | asb11 | -0.148 |
| kirrel3l | 0.232 | cited4b | -0.142 |
| msgn1 | 0.231 | si:ch1073-80i24.3 | -0.139 |
| wnt11f2 | 0.224 | zic2b | -0.138 |
| tbxta | 0.221 | aldob | -0.133 |
| zswim5 | 0.217 | foxd5 | -0.129 |
| dkk1b | 0.217 | glulb | -0.114 |
| ism1 | 0.217 | shisa2a | -0.100 |
| fgf3 | 0.214 | inka1a | -0.099 |
| efnb2a | 0.214 | si:ch211-173m16.2 | -0.096 |
| fscn1a | 0.213 | h3f3d | -0.096 |
| mespab | 0.212 | si:ch211-152c2.3 | -0.095 |
| dusp4 | 0.212 | mych | -0.093 |
| efna1a | 0.210 | polr3gla | -0.092 |
| pitx2 | 0.210 | cdca7a | -0.089 |
| wu:fb97g03 | 0.207 | sb:cb81 | -0.089 |
| sp5a | 0.196 | ddx5 | -0.087 |
| foxa | 0.196 | gpd1b | -0.086 |
| zic2a | 0.195 | mex3b | -0.085 |
| plekhn1 | 0.194 | kazald2 | -0.080 |
| ndr2 | 0.193 | hnrnpabb | -0.077 |
| osr1 | 0.193 | dnajb1b | -0.076 |
| sebox | 0.192 | cxcr4a | -0.075 |
| cyp27c1 | 0.192 | marcksl1b | -0.074 |
| BX927327.1 | 0.190 | mplkip | -0.073 |
| aplnrb | 0.188 | snai2 | -0.073 |
| krt99 | 0.185 | nnr | -0.073 |
| rnd1b | 0.181 | pfkfb4b | -0.071 |
| flrt3 | 0.180 | srsf5a | -0.071 |
| lft2 | 0.178 | hmgb2a | -0.070 |
| sox32 | 0.177 | zgc:64022 | -0.070 |