| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pitx2 | 0.592 | cyt1 | -0.291 |
| alpi.1 | 0.498 | wu:fb18f06 | -0.272 |
| cx43 | 0.498 | si:ch211-195b11.3 | -0.247 |
| irx1b | 0.487 | cldnh | -0.245 |
| slc20a1a | 0.482 | spint2 | -0.233 |
| foxa2 | 0.475 | si:dkey-33i11.4 | -0.224 |
| cldn5a | 0.465 | cldnb | -0.220 |
| hoxb5a | 0.462 | cyt1l | -0.213 |
| pdgfaa | 0.448 | atp1b1b | -0.209 |
| slc38a3a | 0.448 | cldne | -0.206 |
| cd44a | 0.446 | krt4 | -0.202 |
| tfr1a | 0.446 | si:dkey-193p11.2 | -0.199 |
| tnfrsf19 | 0.420 | selenow1 | -0.193 |
| foxi2 | 0.415 | icn2 | -0.191 |
| tspan11 | 0.414 | nqo1 | -0.186 |
| krt94 | 0.413 | soul2 | -0.185 |
| map7d1b | 0.401 | ndrg3a | -0.171 |
| c1qtnf1 | 0.397 | zgc:110333 | -0.169 |
| crip3 | 0.395 | selenow2b | -0.168 |
| pcdh7a | 0.394 | foxi3b | -0.167 |
| nog3 | 0.390 | si:dkey-247k7.2 | -0.165 |
| wnt2 | 0.388 | si:ch211-79k12.1 | -0.165 |
| pcolcea | 0.382 | oclnb | -0.162 |
| dlx2b | 0.375 | si:ch73-31d8.2 | -0.159 |
| bcam | 0.372 | ap1s3b | -0.159 |
| sp6 | 0.367 | zgc:193505 | -0.158 |
| dact2 | 0.363 | sgk2a | -0.152 |
| prss35 | 0.362 | mgst1.2 | -0.150 |
| shha | 0.354 | LOC799574 | -0.149 |
| fam20a | 0.354 | fuca1.1 | -0.148 |
| eva1a | 0.347 | abcb5 | -0.146 |
| tfe3a | 0.345 | si:dkey-16p21.8 | -0.146 |
| msx2a | 0.345 | tmem176l.4 | -0.146 |
| pthlha | 0.341 | mpc1 | -0.144 |
| palld | 0.332 | atp5if1b | -0.144 |