| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mespab | 0.615 | sox3 | -0.462 |
| lhx1a | 0.579 | cxcr4b | -0.339 |
| BX927327.1 | 0.563 | id1 | -0.335 |
| wnt11f2 | 0.555 | sox19a | -0.304 |
| dkk1b | 0.553 | cited4b | -0.256 |
| FP102169.1 | 0.551 | asb11 | -0.241 |
| tbxta | 0.544 | cxcr4a | -0.233 |
| lft1 | 0.520 | zic2b | -0.221 |
| fgf8a | 0.517 | inka1a | -0.206 |
| ndr2 | 0.516 | foxd5 | -0.204 |
| msgn1 | 0.494 | si:ch1073-80i24.3 | -0.194 |
| aplnrb | 0.488 | sb:cb81 | -0.184 |
| gata5 | 0.485 | shisa2a | -0.173 |
| sebox | 0.477 | aldob | -0.156 |
| foxa | 0.466 | pfkfb4b | -0.152 |
| zic2a | 0.450 | foxh1 | -0.150 |
| aldh1a2 | 0.441 | glulb | -0.141 |
| pitx2 | 0.437 | gpd1b | -0.139 |
| efnb2b | 0.430 | si:ch211-170d8.2 | -0.135 |
| mespaa | 0.429 | sox2 | -0.130 |
| ndr1 | 0.426 | zgc:64022 | -0.121 |
| trib3 | 0.418 | sfrp1a | -0.115 |
| cyp27c1 | 0.417 | hmgb2a | -0.112 |
| fscn1a | 0.411 | pkdccb | -0.111 |
| sp5a | 0.406 | si:ch211-152c2.3 | -0.110 |
| gata6 | 0.398 | foxd3 | -0.109 |
| dusp4 | 0.389 | alcamb | -0.108 |
| fgf3 | 0.389 | nnr | -0.108 |
| efnb2a | 0.381 | snai2 | -0.107 |
| wu:fb97g03 | 0.376 | tubb4b | -0.105 |
| notum1a | 0.372 | her8a | -0.105 |
| flrt3 | 0.372 | gadd45ga | -0.105 |
| tpbga | 0.360 | mex3b | -0.103 |
| ism1 | 0.358 | kazald2 | -0.103 |
| irx3a | 0.355 | crabp2b | -0.102 |