| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbxta | 0.197 | sox3 | -0.162 |
| wnt11f2 | 0.193 | sox19a | -0.093 |
| sebox | 0.155 | cxcr4b | -0.091 |
| zswim5 | 0.145 | id1 | -0.090 |
| fscn1a | 0.141 | si:ch1073-80i24.3 | -0.079 |
| BX927327.1 | 0.138 | cited4b | -0.078 |
| hes6 | 0.134 | foxd5 | -0.076 |
| tpbga | 0.133 | cxcr4a | -0.076 |
| notum1a | 0.131 | zic2b | -0.072 |
| wu:fb97g03 | 0.130 | shisa2a | -0.071 |
| wnt5b | 0.129 | asb11 | -0.069 |
| rasgef1ba | 0.127 | si:ch211-170d8.2 | -0.066 |
| cdx4 | 0.125 | si:ch211-173m16.2 | -0.064 |
| osr1 | 0.123 | kazald2 | -0.064 |
| mespab | 0.122 | si:ch211-152c2.3 | -0.063 |
| FP102169.1 | 0.121 | LOC108190024 | -0.063 |
| p4ha2 | 0.119 | lfng | -0.062 |
| lhx1a | 0.119 | pkdccb | -0.060 |
| aldh1a2 | 0.118 | inka1a | -0.059 |
| im:7138239 | 0.115 | glulb | -0.059 |
| foxc1a | 0.114 | snai2 | -0.056 |
| eve1 | 0.109 | aldob | -0.055 |
| ddit4 | 0.108 | sfrp1a | -0.052 |
| lft1 | 0.106 | ddx39aa | -0.051 |
| plekhg5b | 0.105 | gata2a | -0.050 |
| tbx16 | 0.104 | polr3gla | -0.049 |
| ndr2 | 0.104 | gadd45ga | -0.049 |
| msgn1 | 0.103 | apoeb | -0.048 |
| dkk1b | 0.100 | fgfr4 | -0.047 |
| pitx2 | 0.098 | sb:cb81 | -0.047 |
| tmtops3a | 0.097 | mex3b | -0.046 |
| efna1a | 0.097 | mych | -0.046 |
| foxa | 0.096 | gpd1b | -0.045 |
| ntng1a | 0.095 | sult6b1 | -0.045 |
| acvr1ba | 0.095 | mycn | -0.045 |