| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msx1b | 0.324 | eno1a | -0.112 |
| dlx5a | 0.323 | six1b | -0.110 |
| bambia | 0.313 | calml4a | -0.105 |
| vox | 0.291 | otofb | -0.104 |
| dkk1b | 0.289 | tspan13b | -0.104 |
| bmper | 0.251 | gpx2 | -0.104 |
| msx3 | 0.251 | stard15 | -0.104 |
| dlx4b | 0.233 | calm1a | -0.103 |
| smad9 | 0.216 | cd164l2 | -0.103 |
| bmp2b | 0.201 | rbm24a | -0.103 |
| id3 | 0.199 | twf2b | -0.103 |
| dlx3b | 0.199 | atp1a3b | -0.103 |
| meis1b | 0.187 | dnajc5b | -0.102 |
| ved | 0.187 | prr15la | -0.101 |
| hmx1 | 0.183 | s100t | -0.101 |
| rassf10a | 0.180 | nptna | -0.101 |
| metrnla | 0.178 | myo6b | -0.101 |
| id1 | 0.178 | gapdhs | -0.101 |
| dlx2a | 0.178 | eya1 | -0.100 |
| msx1a | 0.170 | pcsk5a | -0.100 |
| dlx6a | 0.169 | osbpl1a | -0.099 |
| si:dkey-261h17.1 | 0.168 | CR925719.1 | -0.098 |
| bmp4 | 0.168 | cabp2b | -0.098 |
| hmx4 | 0.168 | tuba1a | -0.097 |
| zpld1a | 0.167 | gipc3 | -0.097 |
| znf503 | 0.166 | ap3s1.1 | -0.096 |
| dkk1a | 0.166 | sall3b | -0.095 |
| wnt7aa | 0.164 | si:ch211-172l8.4 | -0.095 |
| frem1a | 0.163 | si:ch73-15n15.3 | -0.094 |
| sox1b | 0.163 | gpx1b | -0.093 |
| fn1a | 0.160 | six1a | -0.093 |
| sox11a | 0.159 | slc17a8 | -0.093 |
| bmp5 | 0.151 | clic5b | -0.092 |
| dlx1a | 0.148 | spa17 | -0.092 |
| cart3 | 0.146 | nr2f1a | -0.092 |