| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx4a | 0.233 | col1a1b | -0.064 |
| dlx5a | 0.204 | col5a2a | -0.055 |
| dlx3b | 0.199 | sparc | -0.054 |
| dlx4b | 0.179 | si:ch1073-459j12.1 | -0.052 |
| dlx6a | 0.174 | rbp4 | -0.047 |
| msx1b | 0.173 | meis2b | -0.047 |
| shox | 0.139 | meox1 | -0.046 |
| gata2a | 0.127 | vwde | -0.046 |
| msx2b | 0.126 | krt94 | -0.045 |
| dlx2a | 0.113 | col4a1 | -0.044 |
| dlx1a | 0.104 | krt15 | -0.043 |
| CU929240.1 | 0.100 | si:ch211-251b21.1 | -0.042 |
| id1 | 0.099 | anxa1a | -0.041 |
| msx3 | 0.095 | cavin2b | -0.040 |
| mab21l2 | 0.094 | fxyd1 | -0.040 |
| si:dkey-261e22.4 | 0.092 | hic1 | -0.040 |
| mctp1a | 0.090 | ccl25b | -0.039 |
| fgfbp2a | 0.089 | meis1a | -0.039 |
| twist3 | 0.087 | ebf3a | -0.038 |
| cdon | 0.085 | pcolcea | -0.038 |
| bambia | 0.079 | crabp1b | -0.038 |
| mycn | 0.078 | col1a1a | -0.038 |
| mcm7 | 0.075 | cnmd | -0.038 |
| grem2b | 0.075 | tuba8l2 | -0.038 |
| sem1 | 0.074 | klf2a | -0.038 |
| zfhx4 | 0.073 | col1a2 | -0.037 |
| tbx2b | 0.071 | pbx1b | -0.037 |
| mab21l1 | 0.071 | sfrp2 | -0.037 |
| ahcy | 0.071 | col5a1 | -0.037 |
| eif3ba | 0.071 | ier2b | -0.036 |
| ran | 0.070 | mfap5 | -0.036 |
| ccnd2a | 0.070 | btg2 | -0.036 |
| fen1 | 0.070 | mia | -0.035 |
| ism1 | 0.069 | ctgfa | -0.035 |
| hsp90ab1 | 0.069 | cebpd | -0.035 |