| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msx1b | 0.183 | elavl3 | -0.092 |
| wnt11r | 0.131 | rtn1a | -0.074 |
| pax3a | 0.131 | myt1b | -0.072 |
| irx1b | 0.129 | tmsb | -0.070 |
| zic2a | 0.127 | sox11b | -0.061 |
| zic2b | 0.124 | gpm6aa | -0.061 |
| pcna | 0.121 | nova2 | -0.059 |
| fen1 | 0.119 | nhlh2 | -0.059 |
| npm1a | 0.117 | onecut1 | -0.059 |
| dkc1 | 0.114 | dlb | -0.059 |
| znfl2a | 0.113 | myt1a | -0.059 |
| rpa2 | 0.113 | si:ch211-57n23.4 | -0.058 |
| selenoh | 0.113 | gpm6ab | -0.058 |
| nasp | 0.111 | scrt2 | -0.057 |
| si:dkey-102m7.3 | 0.111 | isl1 | -0.056 |
| snu13b | 0.110 | stmn1b | -0.055 |
| dut | 0.110 | nkx6.1 | -0.055 |
| nop58 | 0.110 | sulf2b | -0.055 |
| hspb1 | 0.110 | hapln1a | -0.054 |
| nutf2l | 0.110 | tubb5 | -0.054 |
| cdx4 | 0.109 | LOC100537384 | -0.054 |
| slbp | 0.109 | insm1a | -0.053 |
| tal1 | 0.108 | tuba1c | -0.052 |
| nradd | 0.108 | slit3 | -0.052 |
| mcm6 | 0.108 | pik3r3b | -0.052 |
| sfrp2 | 0.107 | srrm4 | -0.052 |
| mcm7 | 0.107 | adcyap1b | -0.052 |
| chaf1a | 0.107 | ube2d4 | -0.051 |
| zic5 | 0.106 | tuba8l3 | -0.051 |
| fbl | 0.106 | vim | -0.051 |
| cdca7a | 0.105 | ebf2 | -0.051 |
| mcm5 | 0.105 | COX3 | -0.051 |
| edn1 | 0.104 | alcama | -0.051 |
| lig1 | 0.104 | gng3 | -0.050 |
| orc4 | 0.103 | gap43 | -0.050 |