| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pitx3 | 0.152 | hapln1a | -0.050 |
| scinla | 0.099 | mab21l2 | -0.046 |
| ca4a | 0.099 | sec61g | -0.045 |
| lmx1ba | 0.096 | fgfbp2b | -0.044 |
| pitx2 | 0.095 | col9a3 | -0.043 |
| zgc:158423 | 0.094 | CU929237.1 | -0.042 |
| tkta | 0.094 | meis1b | -0.042 |
| msc | 0.091 | cdh11 | -0.042 |
| dmrta2 | 0.090 | hand2 | -0.040 |
| cx43 | 0.087 | col2a1a | -0.039 |
| atp1b1a | 0.087 | dlx5a | -0.038 |
| slc8a1b | 0.086 | barx1 | -0.037 |
| si:dkey-164f24.2 | 0.085 | rplp2l | -0.037 |
| alpl | 0.085 | cpn1 | -0.037 |
| slc6a22.1 | 0.083 | rarga | -0.036 |
| XLOC-018373 | 0.082 | col9a1a | -0.036 |
| epd | 0.082 | ptmaa | -0.036 |
| flvcr2b | 0.080 | XLOC-035413 | -0.036 |
| myod1 | 0.080 | rpl39 | -0.035 |
| slc7a2 | 0.080 | cspg4 | -0.035 |
| lrrc58a | 0.079 | col9a2 | -0.035 |
| ggctb | 0.078 | zgc:153675 | -0.035 |
| slc38a3a | 0.078 | fkbp11 | -0.034 |
| igfbp2a | 0.077 | ecrg4a | -0.034 |
| apof | 0.077 | lhx6 | -0.033 |
| SLC22A7 (1 of many) | 0.075 | dlx2a | -0.033 |
| slc20a2 | 0.074 | gsc | -0.033 |
| LOC110439517 | 0.073 | tnc | -0.033 |
| lmx1bb | 0.073 | col11a2 | -0.033 |
| ugt2a4 | 0.072 | kdelr3 | -0.033 |
| fxyd1 | 0.072 | serp1 | -0.032 |
| tubb6 | 0.071 | h3f3d | -0.032 |
| npy8br | 0.070 | matn4 | -0.032 |
| wnt9b | 0.070 | inka1a | -0.032 |
| soul5 | 0.070 | cxcl12a | -0.032 |