| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| meis2b | 0.362 | hmgb2a | -0.250 |
| mab21l1 | 0.332 | msna | -0.200 |
| meis1b | 0.321 | si:ch73-281n10.2 | -0.195 |
| hoxb3a | 0.295 | sox3 | -0.192 |
| hoxd3a | 0.291 | id1 | -0.192 |
| rbfox1 | 0.286 | XLOC-003690 | -0.187 |
| gpm6ab | 0.283 | XLOC-003689 | -0.183 |
| pik3r3b | 0.279 | pcna | -0.179 |
| meis2a | 0.263 | chaf1a | -0.174 |
| rbfox3a | 0.261 | akap12b | -0.173 |
| tnrc6c1 | 0.257 | anp32b | -0.173 |
| elavl4 | 0.256 | sox19a | -0.168 |
| tshz2 | 0.255 | sdc4 | -0.168 |
| snap25a | 0.252 | banf1 | -0.168 |
| gpc1a | 0.252 | notch3 | -0.166 |
| gng3 | 0.251 | lig1 | -0.165 |
| stmn1b | 0.248 | sb:cb81 | -0.165 |
| zfhx3 | 0.248 | mki67 | -0.165 |
| pbx3b | 0.246 | cldn5a | -0.164 |
| zc4h2 | 0.232 | her15.1 | -0.164 |
| tmem59l | 0.232 | ranbp1 | -0.162 |
| tshz3b | 0.231 | bzw1b | -0.162 |
| nell2b | 0.230 | dla | -0.161 |
| rtn1b | 0.230 | tspan7 | -0.159 |
| tuba1c | 0.229 | tuba8l4 | -0.159 |
| ptmaa | 0.229 | vamp3 | -0.158 |
| syt2a | 0.228 | XLOC-003692 | -0.157 |
| ckbb | 0.228 | hmgb2b | -0.157 |
| csdc2a | 0.225 | lfng | -0.156 |
| ebf3a | 0.224 | nop58 | -0.156 |
| elavl3 | 0.224 | rtca | -0.156 |
| hoxc4a | 0.223 | hspb1 | -0.156 |
| roraa | 0.223 | stmn1a | -0.155 |
| cplx2l | 0.222 | ccnd1 | -0.153 |
| thsd7aa | 0.221 | btg2 | -0.152 |