| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nhlh2 | 0.232 | id1 | -0.132 |
| onecut1 | 0.228 | XLOC-003690 | -0.114 |
| scrt2 | 0.217 | notch3 | -0.111 |
| onecut2 | 0.204 | cldn5a | -0.108 |
| zgc:77784 | 0.201 | sox3 | -0.101 |
| elavl3 | 0.197 | mdka | -0.099 |
| onecutl | 0.195 | cd82a | -0.098 |
| stap2a | 0.189 | sox19a | -0.093 |
| ebf2 | 0.182 | fabp7a | -0.092 |
| epb41a | 0.178 | fosab | -0.092 |
| scrt1a | 0.177 | sdc4 | -0.092 |
| myt1a | 0.174 | atp1a1b | -0.090 |
| myt1b | 0.170 | CU467822.1 | -0.089 |
| jagn1a | 0.169 | vamp3 | -0.088 |
| thsd7aa | 0.169 | msna | -0.087 |
| LOC100537384 | 0.164 | her12 | -0.086 |
| insm1b | 0.162 | her4.1 | -0.084 |
| uncx4.1 | 0.162 | sox2 | -0.082 |
| uncx | 0.161 | cspg5a | -0.078 |
| insm1a | 0.157 | atp1b4 | -0.078 |
| robo3 | 0.157 | zgc:165461 | -0.078 |
| spsb4a | 0.155 | qki2 | -0.078 |
| ebf1a | 0.155 | COX7A2 (1 of many) | -0.077 |
| adam22 | 0.153 | gas1b | -0.076 |
| gng2 | 0.153 | pgrmc1 | -0.076 |
| dlb | 0.153 | nrarpb | -0.076 |
| ebf3a | 0.150 | gpm6bb | -0.076 |
| lin28a | 0.150 | si:ch73-281n10.2 | -0.075 |
| stmn1b | 0.150 | gfap | -0.075 |
| lima1a | 0.150 | sb:cb81 | -0.074 |
| si:ch211-215d8.2 | 0.149 | btg2 | -0.074 |
| skor1a | 0.145 | msi1 | -0.073 |
| kif21b | 0.145 | XLOC-003689 | -0.073 |
| si:dkey-280e21.3 | 0.145 | cd63 | -0.073 |
| tmsb | 0.143 | her8a | -0.072 |