| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| barx1 | 0.322 | tnn | -0.111 |
| dlx1a | 0.250 | cthrc1a | -0.110 |
| dlx2a | 0.239 | fstl1a | -0.108 |
| mab21l2 | 0.238 | akap12b | -0.106 |
| lhx8a | 0.220 | matn4 | -0.095 |
| hpgd | 0.220 | fxyd1 | -0.091 |
| anxa3b | 0.166 | si:dkey-238c7.16 | -0.090 |
| mrrf | 0.165 | col11a1a | -0.084 |
| pax9 | 0.164 | tfpia | -0.080 |
| dlx5a | 0.149 | tmem88b | -0.076 |
| hoxd4a | 0.144 | tuba8l2 | -0.075 |
| hoxb3a | 0.139 | alcama | -0.075 |
| gsc | 0.139 | pdgfrl | -0.074 |
| sim2 | 0.138 | cnmd | -0.073 |
| sim2.1 | 0.136 | si:dkey-56m19.5 | -0.073 |
| foxf1 | 0.135 | ca6 | -0.071 |
| LO018188.1 | 0.126 | tmsb4x | -0.070 |
| foxf2a | 0.126 | zic2a | -0.069 |
| igf1 | 0.125 | pitx2 | -0.067 |
| epha4b | 0.124 | CABZ01075068.1 | -0.066 |
| hoxb5a | 0.122 | lmx1bb | -0.066 |
| ecrg4a | 0.121 | csrp1a | -0.065 |
| lmo4a | 0.119 | tbx15 | -0.065 |
| hapln1a | 0.116 | thbs1b | -0.064 |
| spon2b | 0.115 | kitlga | -0.064 |
| rspo2 | 0.114 | emilin1a | -0.063 |
| ahcy | 0.114 | col9a3 | -0.063 |
| ifitm1 | 0.113 | hoxd9a | -0.063 |
| KCTD15 | 0.112 | marcksl1b | -0.063 |
| sall1a | 0.112 | fgfr3 | -0.063 |
| tbx2a | 0.109 | sema3e | -0.062 |
| col6a4a | 0.108 | cxadr | -0.062 |
| six1a | 0.108 | CABZ01072614.1 | -0.062 |
| net1 | 0.107 | ftr82 | -0.062 |
| twist1b | 0.106 | sort1a | -0.061 |