| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her12 | 0.200 | nkx2.3 | -0.115 |
| her15.1 | 0.194 | cfd | -0.102 |
| dlx4a | 0.183 | si:ch211-62a1.3 | -0.091 |
| her4.1 | 0.179 | XLOC-041870 | -0.087 |
| her4.2 | 0.176 | desmb | -0.077 |
| dlx5a | 0.175 | ociad2 | -0.076 |
| XLOC-003692 | 0.174 | prdx1 | -0.075 |
| dla | 0.165 | ntn5 | -0.074 |
| XLOC-003689 | 0.165 | hlx1 | -0.067 |
| abhd6a | 0.158 | col6a2 | -0.066 |
| XLOC-003690 | 0.156 | bag2 | -0.066 |
| sox19a | 0.151 | ppp1r14aa | -0.064 |
| ms4a17a.7 | 0.147 | hand2 | -0.062 |
| CU467822.1 | 0.144 | cald1b | -0.062 |
| inavaa | 0.141 | ncaldb | -0.062 |
| si:ch211-137a8.4 | 0.135 | XLOC-025423 | -0.062 |
| neurog1 | 0.132 | BX322618.1 | -0.061 |
| ism1 | 0.131 | si:dkeyp-66d1.7 | -0.060 |
| CR751602.2 | 0.125 | XLOC-028370 | -0.058 |
| col8a2 | 0.124 | pnp4a | -0.058 |
| CR457444.7 | 0.123 | hspb1 | -0.058 |
| LOC798783 | 0.122 | arhgap20b | -0.058 |
| zeb2a | 0.122 | bmp16 | -0.057 |
| her2 | 0.122 | si:dkey-56m19.5 | -0.057 |
| LOC110437705 | 0.121 | BX901920.1 | -0.057 |
| si:ch73-21g5.7 | 0.120 | col4a6 | -0.056 |
| dlx3b | 0.120 | cnn1b | -0.056 |
| dbx1a | 0.118 | col6a1 | -0.055 |
| CU634008.1 | 0.117 | meis1a | -0.055 |
| her4.4 | 0.117 | tmem119b | -0.055 |
| wnt4a | 0.116 | smtna | -0.055 |
| gadd45gb.1 | 0.116 | cxcl14 | -0.054 |
| CABZ01038493.1 | 0.114 | plod2 | -0.054 |
| ascl1b | 0.114 | tagln | -0.053 |
| zgc:162144 | 0.113 | gpia | -0.053 |