Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-041870 | 0.456 | fabp3 | -0.038 |
| BX908750.1 | 0.380 | marcksb | -0.033 |
| BX322618.1 | 0.366 | nova2 | -0.033 |
| XLOC-002639 | 0.358 | si:ch211-137a8.4 | -0.033 |
| XLOC-025423 | 0.354 | apex1 | -0.030 |
| si:ch211-62a1.3 | 0.342 | si:ch211-288g17.3 | -0.030 |
| desmb | 0.327 | seta | -0.029 |
| BX005183.3 | 0.279 | tuba1c | -0.029 |
| XLOC-028370 | 0.275 | hmgb3a | -0.028 |
| mylkb | 0.267 | snrpb | -0.028 |
| tagln | 0.266 | snrpd1 | -0.028 |
| myh11a | 0.265 | tuba1a | -0.028 |
| BX248082.1 | 0.264 | ddx39ab | -0.027 |
| acta2 | 0.254 | elavl3 | -0.027 |
| csrp1b | 0.249 | nucks1a | -0.027 |
| XLOC-026848 | 0.242 | her15.1 | -0.027 |
| BX088707.3 | 0.241 | snrpd2 | -0.026 |
| XLOC-005449 | 0.237 | snrpe | -0.026 |
| XLOC-005448 | 0.236 | tmpob | -0.026 |
| cnn1b | 0.233 | cx43.4 | -0.025 |
| XLOC-033137 | 0.216 | hes6 | -0.025 |
| aoc2 | 0.214 | ilf2 | -0.025 |
| myl9a | 0.204 | setb | -0.025 |
| ntn5 | 0.203 | snrpf | -0.025 |
| lmod1b | 0.194 | cbx3a | -0.024 |
| smtna | 0.194 | hnrnph1l | -0.024 |
| XLOC-020301 | 0.192 | smarce1 | -0.024 |
| LOC110439915 | 0.191 | sox11b | -0.024 |
| XLOC-026836 | 0.188 | stmn1a | -0.024 |
| hlx1 | 0.185 | XLOC-003689 | -0.024 |
| nkx2.3 | 0.185 | XLOC-003692 | -0.024 |
| XLOC-023492 | 0.183 | cdkn1ca | -0.023 |
| foxf1 | 0.182 | h2afva | -0.023 |
| pdlim3a | 0.181 | hmgb1b | -0.023 |
| cfd | 0.176 | hmgb3b | -0.023 |