Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| srl | 0.345 | hmgb1b | -0.057 |
| desma | 0.343 | si:ch211-288g17.3 | -0.053 |
| txlnba | 0.343 | tuba1c | -0.051 |
| cav3 | 0.336 | nova2 | -0.049 |
| klhl31 | 0.336 | chd4a | -0.047 |
| acta1a | 0.334 | gpm6aa | -0.047 |
| txlnbb | 0.333 | ywhaqb | -0.047 |
| apobec2a | 0.326 | marcksl1a | -0.047 |
| cacng1a | 0.325 | h2afva | -0.045 |
| zgc:158296 | 0.323 | cbx5 | -0.044 |
| actc1a | 0.323 | ckbb | -0.044 |
| obsl1a | 0.322 | gpm6ab | -0.043 |
| CABZ01072309.1 | 0.320 | rnasekb | -0.043 |
| tnnt2c | 0.317 | si:ch211-137a8.4 | -0.043 |
| CABZ01078594.1 | 0.316 | tuba1a | -0.043 |
| CABZ01072309.2 | 0.316 | mdkb | -0.042 |
| obscnb | 0.315 | seta | -0.042 |
| tnni2b.1 | 0.312 | anp32a | -0.041 |
| stac3 | 0.311 | zc4h2 | -0.041 |
| tmem182a | 0.311 | elavl3 | -0.040 |
| casq2 | 0.310 | gnb1b | -0.040 |
| cavin4b | 0.308 | stmn1a | -0.040 |
| chrnd | 0.308 | gapdhs | -0.039 |
| aldoab | 0.307 | hmgn3 | -0.039 |
| tmem38a | 0.306 | si:dkey-276j7.1 | -0.039 |
| trdn | 0.306 | tubb5 | -0.039 |
| smyd1b | 0.304 | ywhaqa | -0.039 |
| CR376766.2 | 0.303 | atrx | -0.038 |
| mybphb | 0.299 | ddx5 | -0.038 |
| klhl40b | 0.298 | marcksb | -0.038 |
| ldb3a | 0.298 | rbbp4 | -0.038 |
| fitm1 | 0.296 | tmeff1b | -0.038 |
| rbfox1l | 0.296 | atp6v0cb | -0.037 |
| cavin4a | 0.294 | ctsla | -0.037 |
| smyd2b | 0.293 | morf4l1 | -0.037 |