Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.065 | tuba1c | -0.028 |
| LOC100008030 | 0.060 | gpm6aa | -0.026 |
| tbx16 | 0.058 | nova2 | -0.025 |
| polr3gla | 0.057 | rnasekb | -0.025 |
| zgc:56699 | 0.057 | rtn1a | -0.024 |
| lrwd1 | 0.056 | stmn1b | -0.024 |
| ved | 0.056 | atp6v0cb | -0.023 |
| nnr | 0.055 | gapdhs | -0.023 |
| s100a1 | 0.054 | calm1a | -0.023 |
| si:ch1073-80i24.3 | 0.054 | si:ch1073-429i10.3.1 | -0.023 |
| vox | 0.054 | elavl3 | -0.022 |
| BX530721.1 | 0.053 | ccni | -0.021 |
| vrtn | 0.053 | gng3 | -0.021 |
| avd | 0.052 | krt4 | -0.021 |
| ddx4 | 0.050 | ckbb | -0.020 |
| si:dkeyp-114g9.1 | 0.050 | cyt1 | -0.020 |
| stm | 0.050 | gpm6ab | -0.020 |
| akap12b | 0.049 | sncb | -0.020 |
| asb11 | 0.049 | vamp2 | -0.020 |
| si:dkey-228b2.6 | 0.049 | atp6v1e1b | -0.019 |
| h1m | 0.048 | atp6v1g1 | -0.019 |
| add3b | 0.047 | atpv0e2 | -0.019 |
| hspb1 | 0.047 | cspg5a | -0.019 |
| BX005461.1 | 0.046 | cyt1l | -0.019 |
| foxh1 | 0.046 | elavl4 | -0.019 |
| si:dkey-66i24.9 | 0.046 | mdkb | -0.019 |
| si:dkey-68o6.5 | 0.046 | snap25a | -0.019 |
| si:dkey-92i17.2 | 0.046 | stx1b | -0.019 |
| eve1 | 0.045 | zgc:65894 | -0.019 |
| si:dkeyp-2e4.3 | 0.045 | epb41a | -0.018 |
| ccna1 | 0.044 | fam168a | -0.018 |
| foxd5 | 0.044 | fez1 | -0.018 |
| LOC101885477 | 0.044 | olfm1b | -0.018 |
| bmp7a | 0.043 | pvalb1 | -0.018 |
| ing5b | 0.043 | pvalb2 | -0.018 |