Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-26g8.4 | 0.511 | prdx2 | -0.030 |
| si:dkey-239j18.3 | 0.497 | hmgb1b | -0.028 |
| he1.2 | 0.474 | fxyd6l | -0.026 |
| sb:cb470 | 0.425 | tuba1c | -0.026 |
| tmprss9 | 0.402 | hmgb3a | -0.025 |
| si:dkey-239j18.2 | 0.398 | si:ch211-288g17.3 | -0.025 |
| si:dkey-269i1.4 | 0.396 | si:dkey-56m19.5 | -0.025 |
| ctslb | 0.395 | nova2 | -0.024 |
| zgc:174153 | 0.391 | si:ch73-46j18.5 | -0.023 |
| wu:fa26c03 | 0.347 | cbx3a | -0.022 |
| bhlha15 | 0.334 | fam168a | -0.022 |
| vtcn1 | 0.326 | gpm6aa | -0.022 |
| si:dkey-26g8.5 | 0.316 | ldhba | -0.022 |
| si:dkey-269i1.3 | 0.311 | chd4a | -0.021 |
| he1.1 | 0.302 | hmgb3b | -0.021 |
| foxe3 | 0.259 | marcksb | -0.021 |
| timp4.1 | 0.255 | tuba1a | -0.021 |
| mgp | 0.248 | vdac3 | -0.021 |
| scin | 0.226 | alyref | -0.020 |
| xkr9 | 0.213 | ccni | -0.020 |
| slc30a8 | 0.199 | gapdhs | -0.020 |
| b3gnt5b | 0.191 | map2k6 | -0.020 |
| si:ch211-163l21.8 | 0.188 | rtn1a | -0.020 |
| klf17 | 0.182 | si:ch211-137a8.4 | -0.020 |
| fmn1 | 0.181 | si:dkey-276j7.1 | -0.020 |
| gpr160 | 0.168 | stmn1b | -0.020 |
| mctp2b | 0.161 | zc4h2 | -0.020 |
| svopl | 0.160 | zgc:153409 | -0.020 |
| lad1 | 0.159 | celf2 | -0.019 |
| sytl4 | 0.159 | elavl3 | -0.019 |
| zgc:158403 | 0.147 | fabp3 | -0.019 |
| CT033796.1 | 0.144 | h2afva | -0.019 |
| pitx2 | 0.140 | ip6k2a | -0.019 |
| grtp1b | 0.134 | nono | -0.019 |
| fkbp11 | 0.133 | pvalb2 | -0.019 |