Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| myct1a | 0.206 | fabp3 | -0.029 |
| plvapb | 0.202 | hmgb1b | -0.027 |
| kdr | 0.193 | tuba1c | -0.026 |
| si:ch211-33e4.2 | 0.192 | marcksb | -0.025 |
| pecam1 | 0.191 | si:ch211-137a8.4 | -0.025 |
| si:dkeyp-97a10.2 | 0.187 | si:ch211-288g17.3 | -0.024 |
| notchl | 0.184 | hmgb3a | -0.023 |
| ecscr | 0.183 | tuba1a | -0.022 |
| rasip1 | 0.180 | elavl3 | -0.020 |
| tie1 | 0.180 | gpm6aa | -0.020 |
| si:ch211-145b13.6 | 0.178 | tmeff1b | -0.020 |
| myct1b | 0.174 | ddx39ab | -0.019 |
| clec14a | 0.173 | nucks1a | -0.019 |
| etv2 | 0.172 | sox11b | -0.019 |
| exoc3l2a | 0.167 | apex1 | -0.018 |
| gpr182 | 0.167 | seta | -0.018 |
| pcdh12 | 0.165 | si:ch211-51e12.7 | -0.018 |
| cdh5 | 0.163 | sox11a | -0.018 |
| XLOC-014079 | 0.163 | stmn1b | -0.018 |
| she | 0.161 | zc4h2 | -0.018 |
| angpt2a | 0.159 | ckbb | -0.017 |
| scarf1 | 0.159 | cx43.4 | -0.017 |
| LOC108180727 | 0.157 | epb41a | -0.017 |
| adgrl4 | 0.156 | hes6 | -0.017 |
| XLOC-043043 | 0.156 | mdkb | -0.017 |
| egfl7 | 0.153 | setb | -0.017 |
| erg | 0.152 | si:ch211-133n4.4 | -0.017 |
| kdrl | 0.152 | si:dkey-276j7.1 | -0.017 |
| lyve1b | 0.150 | si:dkey-56m19.5 | -0.017 |
| yrk | 0.149 | sox3 | -0.017 |
| LOC101882770 | 0.148 | srsf3b | -0.017 |
| stab1 | 0.147 | stmn1a | -0.017 |
| si:ch73-334d15.2 | 0.146 | tmpob | -0.017 |
| fgd5a | 0.145 | tmsb | -0.017 |
| afap1l1b | 0.144 | tox | -0.017 |