Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| stmn1b | 0.079 | hmgb2a | -0.068 |
| tal2 | 0.075 | pcna | -0.054 |
| tal1 | 0.074 | si:ch73-281n10.2 | -0.054 |
| uncx | 0.071 | id1 | -0.053 |
| rtn1a | 0.069 | anp32b | -0.050 |
| tuba1c | 0.067 | stmn1a | -0.050 |
| dpysl3 | 0.066 | hmga1a | -0.050 |
| mllt11 | 0.066 | msna | -0.049 |
| rtn1b | 0.066 | XLOC-003690 | -0.048 |
| gng3 | 0.066 | sox3 | -0.047 |
| taar11 | 0.066 | ranbp1 | -0.046 |
| gpm6ab | 0.065 | banf1 | -0.046 |
| elavl4 | 0.064 | tuba8l | -0.045 |
| pbx1a | 0.064 | sox19a | -0.045 |
| ebf3a | 0.063 | chaf1a | -0.045 |
| tubb5 | 0.063 | nop58 | -0.045 |
| scrt1a | 0.062 | ccnd1 | -0.045 |
| ywhah | 0.062 | XLOC-003689 | -0.044 |
| elavl3 | 0.062 | mcm7 | -0.044 |
| fez1 | 0.060 | rrm1 | -0.044 |
| si:dkeyp-75h12.5 | 0.060 | rpa3 | -0.044 |
| tfap2a | 0.059 | selenoh | -0.044 |
| gap43 | 0.058 | dut | -0.044 |
| tmeff1b | 0.058 | mki67 | -0.043 |
| tmsb | 0.058 | nutf2l | -0.043 |
| ptmaa | 0.058 | mdka | -0.042 |
| adcyap1b | 0.058 | cldn5a | -0.042 |
| sncb | 0.056 | si:dkey-151g10.6 | -0.041 |
| csdc2a | 0.056 | mcm6 | -0.041 |
| nfixb | 0.055 | npm1a | -0.041 |
| stmn2a | 0.055 | lig1 | -0.041 |
| tmem59l | 0.054 | snu13b | -0.041 |
| tfap2b | 0.054 | fen1 | -0.041 |
| gpc1a | 0.053 | rplp1 | -0.041 |
| inab | 0.053 | cdca7b | -0.040 |