Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC100537538 | 0.311 | akap12b | -0.039 |
| LOC108191338 | 0.245 | col2a1a | -0.039 |
| ccdc78 | 0.245 | sec13 | -0.039 |
| gdf11 | 0.242 | hspb1 | -0.038 |
| alpi.1 | 0.231 | STMP1 | -0.038 |
| lrrc17 | 0.230 | col9a1b | -0.038 |
| CT573204.1 | 0.228 | col11a1a | -0.037 |
| XLOC-023594 | 0.220 | eif3jb | -0.036 |
| pcp4a | 0.218 | krt18a.1 | -0.036 |
| znfl1k | 0.216 | stm | -0.035 |
| nlrp16 | 0.213 | si:ch73-23l24.1 | -0.035 |
| BX005073.1 | 0.211 | zgc:113232 | -0.035 |
| hoxa13a | 0.202 | zgc:162730 | -0.034 |
| fgf20a | 0.201 | si:ch211-152c2.3 | -0.034 |
| her12 | 0.196 | ube2na | -0.034 |
| hoxc13a | 0.193 | zmp:0000000760 | -0.033 |
| notum1b | 0.192 | krr1 | -0.032 |
| her1 | 0.190 | col11a2 | -0.032 |
| si:ch211-1f22.1 | 0.187 | srrm1 | -0.032 |
| mdh1b | 0.182 | cmn | -0.032 |
| her15.1 | 0.178 | ucmab | -0.032 |
| XLOC-012390 | 0.178 | yipf5 | -0.032 |
| parvb | 0.178 | epyc | -0.032 |
| slc34a2a | 0.177 | s100a1 | -0.031 |
| hoxd12a | 0.176 | cmtm6 | -0.031 |
| hoxa11b | 0.175 | FQ323156.1 | -0.031 |
| htr5aa | 0.175 | brd3a | -0.031 |
| dnase1l1l | 0.174 | col9a3 | -0.031 |
| XLOC-008993 | 0.173 | cpn1 | -0.031 |
| LOC101883516 | 0.172 | matn3a | -0.030 |
| crybb2 | 0.171 | marcksl1b | -0.030 |
| zmp:0000000650 | 0.171 | lig1 | -0.030 |
| fgf3 | 0.170 | ell2 | -0.030 |
| LOC101884177 | 0.166 | matn3b | -0.030 |
| her4.1 | 0.164 | ism1 | -0.030 |