Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gata5 | 0.186 | sox3 | -0.120 |
| gata6 | 0.166 | id1 | -0.115 |
| dkk1b | 0.165 | cxcr4b | -0.101 |
| kirrel3l | 0.165 | sox19a | -0.094 |
| FP102169.1 | 0.164 | zic2b | -0.071 |
| pitx2 | 0.159 | cited4b | -0.067 |
| msgn1 | 0.157 | foxd5 | -0.064 |
| cyp27c1 | 0.154 | glulb | -0.061 |
| efnb2a | 0.153 | foxh1 | -0.058 |
| lhx1a | 0.150 | inka1a | -0.057 |
| sox32 | 0.150 | si:ch1073-80i24.3 | -0.057 |
| efnb2b | 0.149 | shisa2a | -0.056 |
| plekhn1 | 0.149 | aldob | -0.055 |
| si:ch211-197h24.9 | 0.146 | asb11 | -0.053 |
| CR847953.1 | 0.144 | cdca7a | -0.052 |
| osr1 | 0.142 | sb:cb81 | -0.046 |
| ism1 | 0.137 | gorab | -0.042 |
| foxa | 0.134 | ppdpfb | -0.042 |
| dusp4 | 0.131 | pfkfb4b | -0.042 |
| sp5a | 0.130 | pkdccb | -0.041 |
| lft1 | 0.130 | hmgb2a | -0.041 |
| tbxta | 0.130 | snx27a | -0.041 |
| lhx1b | 0.129 | idh3g | -0.040 |
| flrt3 | 0.127 | zgc:100951 | -0.040 |
| wu:fb97g03 | 0.127 | sec61b | -0.039 |
| mespab | 0.125 | blf | -0.039 |
| efna1a | 0.122 | h3f3d | -0.039 |
| wnt11f2 | 0.121 | pdcd5 | -0.038 |
| sox17 | 0.120 | cfl1 | -0.038 |
| lft2 | 0.120 | si:dkey-11o15.10 | -0.037 |
| BX927327.1 | 0.119 | XLOC-013632 | -0.037 |
| elovl6 | 0.119 | si:ch211-173m16.2 | -0.036 |
| trib3 | 0.118 | si:ch211-170d8.2 | -0.036 |
| aplnrb | 0.114 | tmem144b | -0.035 |
| sebox | 0.114 | CR450686.3 | -0.035 |