Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-88n24.10 | 0.070 | hmgb2a | -0.061 |
| gpm6ab | 0.064 | pcna | -0.047 |
| fev | 0.063 | id1 | -0.046 |
| gng3 | 0.062 | stmn1a | -0.044 |
| rtn1b | 0.061 | hmgb2b | -0.043 |
| sncb | 0.060 | her15.1 | -0.043 |
| zc4h2 | 0.060 | mdka | -0.043 |
| elavl4 | 0.058 | si:dkey-151g10.6 | -0.043 |
| tmem59l | 0.058 | XLOC-003690 | -0.043 |
| ckbb | 0.058 | sox3 | -0.042 |
| stmn1b | 0.057 | msna | -0.042 |
| tuba1c | 0.057 | anp32b | -0.041 |
| pik3r3b | 0.056 | si:ch73-281n10.2 | -0.041 |
| tnrc6c1 | 0.056 | rrm1 | -0.040 |
| ywhah | 0.056 | chaf1a | -0.040 |
| csdc2a | 0.055 | selenoh | -0.040 |
| rtn1a | 0.055 | sox19a | -0.040 |
| gpc1a | 0.054 | ccnd1 | -0.040 |
| stmn2a | 0.054 | snu13b | -0.039 |
| gap43 | 0.054 | ranbp1 | -0.039 |
| ppfia3 | 0.053 | tuba8l4 | -0.039 |
| gng2 | 0.053 | XLOC-003689 | -0.039 |
| elavl3 | 0.053 | hmga1a | -0.038 |
| atp6v0cb | 0.052 | XLOC-003692 | -0.038 |
| mab21l2 | 0.052 | npm1a | -0.038 |
| cdk5r1b | 0.052 | banf1 | -0.038 |
| stx1b | 0.052 | snrpb | -0.038 |
| ywhag2 | 0.052 | nop58 | -0.038 |
| nsg2 | 0.051 | mki67 | -0.038 |
| aplp1 | 0.050 | nutf2l | -0.038 |
| id4 | 0.050 | dut | -0.038 |
| calm1a | 0.050 | cldn5a | -0.037 |
| gpm6aa | 0.050 | COX7A2 (1 of many) | -0.037 |
| stxbp1a | 0.050 | rpa3 | -0.037 |
| snap25a | 0.049 | lbr | -0.036 |