Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC103911728 | 0.142 | her15.1 | -0.060 |
| lhx1a | 0.104 | id1 | -0.058 |
| gip | 0.104 | XLOC-003690 | -0.057 |
| pou2f2a | 0.100 | mdka | -0.055 |
| CR392026.1 | 0.098 | hmgb2a | -0.054 |
| npffr1l3 | 0.093 | zgc:56493 | -0.053 |
| elavl4 | 0.092 | sox3 | -0.051 |
| zfhx3 | 0.089 | si:dkey-151g10.6 | -0.050 |
| hmx3a | 0.088 | XLOC-003689 | -0.050 |
| LOC100537384 | 0.087 | actb2 | -0.050 |
| XLOC-028064 | 0.084 | cldn5a | -0.049 |
| stoml3a | 0.082 | notch3 | -0.048 |
| si:ch211-236p22.1 | 0.082 | rpl23 | -0.048 |
| zfhx4 | 0.081 | msna | -0.047 |
| cul9.1 | 0.080 | si:ch73-281n10.2 | -0.046 |
| BX936433.2 | 0.080 | sdc4 | -0.045 |
| stxbp1a | 0.080 | ran | -0.045 |
| LOC110437971 | 0.079 | COX7A2 (1 of many) | -0.045 |
| cplx2 | 0.079 | rps2 | -0.044 |
| BX323559.3 | 0.079 | msi1 | -0.043 |
| stx1b | 0.077 | vamp3 | -0.043 |
| pik3r3b | 0.077 | XLOC-003692 | -0.042 |
| XLOC-043690 | 0.076 | hmgb2b | -0.042 |
| sncb | 0.076 | rpl21 | -0.042 |
| XLOC-043113 | 0.075 | rplp1 | -0.041 |
| nrxn1a | 0.075 | sparc | -0.041 |
| inab | 0.075 | btg2 | -0.041 |
| LOC108191970 | 0.075 | tspan7 | -0.040 |
| vamp2 | 0.075 | sox19a | -0.040 |
| csdc2a | 0.073 | her4.2 | -0.040 |
| sncgb | 0.073 | her4.1 | -0.040 |
| snap25a | 0.073 | rps24 | -0.039 |
| znf1150 | 0.073 | cd82a | -0.039 |
| stmn2a | 0.072 | snrpf | -0.039 |
| tuba2 | 0.072 | sb:cb81 | -0.039 |