| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nhlh2 | 0.255 | id1 | -0.165 |
| scrt1a | 0.244 | cldn5a | -0.151 |
| scrt2 | 0.229 | XLOC-003690 | -0.143 |
| stap2a | 0.220 | mdka | -0.138 |
| elavl3 | 0.216 | notch3 | -0.126 |
| myt1b | 0.203 | sox3 | -0.126 |
| zgc:77784 | 0.198 | her12 | -0.115 |
| jagn1a | 0.194 | sdc4 | -0.112 |
| ebf2 | 0.191 | sox19a | -0.111 |
| LOC100537384 | 0.189 | hmgb2a | -0.109 |
| robo3 | 0.187 | fosab | -0.109 |
| insm1a | 0.182 | msi1 | -0.108 |
| ebf3a | 0.181 | si:ch73-281n10.2 | -0.105 |
| gdf11 | 0.177 | vamp3 | -0.104 |
| thsd7aa | 0.175 | her15.1 | -0.102 |
| epb41a | 0.173 | cd82a | -0.102 |
| uncx | 0.173 | msna | -0.101 |
| myt1a | 0.173 | COX7A2 (1 of many) | -0.101 |
| spsb4a | 0.172 | her4.1 | -0.099 |
| uncx4.1 | 0.172 | sox2 | -0.098 |
| dclk2a | 0.168 | XLOC-003689 | -0.097 |
| dlb | 0.168 | selenoh | -0.097 |
| insm1b | 0.166 | her2 | -0.097 |
| atcaya | 0.165 | pcna | -0.096 |
| elovl4a | 0.163 | fabp7a | -0.096 |
| ube2ql1 | 0.160 | gas1b | -0.095 |
| rtn1a | 0.160 | btg2 | -0.095 |
| pdlim5a | 0.159 | tuba8l | -0.094 |
| lima1a | 0.158 | notch1b | -0.093 |
| nkain2 | 0.158 | dut | -0.092 |
| tubb5 | 0.155 | atp1a1b | -0.092 |
| tmeff1b | 0.154 | gfap | -0.092 |
| gng2 | 0.151 | her8a | -0.091 |
| afap1 | 0.151 | ranbp1 | -0.091 |
| MAP3K13 | 0.150 | sb:cb81 | -0.089 |