| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tfap2a | 0.397 | rpl37 | -0.148 |
| dlx3b | 0.308 | rps10 | -0.148 |
| tp63 | 0.263 | zgc:114188 | -0.136 |
| foxi1 | 0.257 | h3f3a | -0.125 |
| tagln2 | 0.252 | zgc:56493 | -0.121 |
| tfap2b | 0.247 | rps17 | -0.109 |
| apoc1 | 0.237 | XLOC-003690 | -0.102 |
| apoeb | 0.220 | cldn5a | -0.100 |
| ved | 0.206 | dut | -0.099 |
| cdh1 | 0.195 | XLOC-003689 | -0.098 |
| tfap2e | 0.193 | mdka | -0.098 |
| tfap2c | 0.193 | COX7A2 (1 of many) | -0.098 |
| mir205 | 0.191 | her15.1 | -0.095 |
| klf17 | 0.190 | hnrnpa0l | -0.093 |
| gata3 | 0.185 | marcksl1a | -0.091 |
| prdm1a | 0.177 | sox3 | -0.090 |
| bmp2b | 0.170 | fabp3 | -0.089 |
| bambia | 0.170 | gfap | -0.089 |
| fermt1 | 0.170 | her2 | -0.088 |
| nr6a1a | 0.167 | rrm2 | -0.084 |
| bmp7a | 0.161 | fabp7a | -0.083 |
| LOC108190024 | 0.159 | msi1 | -0.083 |
| crabp2b | 0.158 | XLOC-003692 | -0.077 |
| klf2a | 0.157 | her12 | -0.075 |
| dnmt3bb.1 | 0.155 | ahcy | -0.073 |
| NC-002333.4 | 0.154 | sparc | -0.073 |
| si:ch211-152c2.3 | 0.154 | notch3 | -0.072 |
| KCTD15 | 0.151 | her4.1 | -0.072 |
| vox | 0.149 | her4.2 | -0.071 |
| cdx4 | 0.148 | abhd6a | -0.071 |
| epcam | 0.147 | nme2b.1 | -0.071 |
| tll1 | 0.147 | si:ch73-21g5.7 | -0.070 |
| XLOC-023447 | 0.143 | LOC100330864 | -0.068 |
| ovol1b | 0.143 | tmsb4x | -0.068 |
| apela | 0.138 | si:ch211-156b7.4 | -0.068 |