| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cth1 | 0.206 | id1 | -0.235 |
| lhx1a | 0.199 | ved | -0.209 |
| gata5 | 0.199 | marcksl1b | -0.176 |
| dkk1b | 0.193 | aldob | -0.171 |
| foxa | 0.188 | stm | -0.166 |
| ism1 | 0.185 | si:dkey-151g10.6 | -0.165 |
| efnb2b | 0.183 | tbx16 | -0.163 |
| msgn1 | 0.183 | si:ch1073-80i24.3 | -0.152 |
| FP102169.1 | 0.180 | dynll1 | -0.150 |
| gata6 | 0.173 | asb11 | -0.144 |
| efnb2a | 0.166 | si:ch73-1a9.3 | -0.140 |
| otx1 | 0.164 | sox3 | -0.139 |
| pitx2 | 0.161 | her7 | -0.138 |
| aplnrb | 0.159 | hnrnpa0b | -0.137 |
| ska2 | 0.157 | cdx4 | -0.133 |
| mid1ip1l | 0.154 | eve1 | -0.133 |
| dusp4 | 0.153 | bambia | -0.131 |
| aplnra | 0.153 | ccnd1 | -0.130 |
| mespaa | 0.153 | si:ch211-152c2.3 | -0.130 |
| mespab | 0.152 | srsf5a | -0.126 |
| btg4 | 0.150 | zic2b | -0.125 |
| ankrd12 | 0.150 | khdrbs1a | -0.125 |
| lft2 | 0.148 | si:ch211-222l21.1 | -0.123 |
| kirrel3l | 0.148 | hmgb2a | -0.123 |
| otx2a | 0.146 | anp32e | -0.121 |
| cldng | 0.145 | si:dkey-56m19.5 | -0.121 |
| slc25a25a | 0.144 | rpl39 | -0.121 |
| fbxo45 | 0.142 | sb:cb81 | -0.119 |
| ell | 0.142 | rps28 | -0.118 |
| frmd4ba | 0.142 | akap12b | -0.118 |
| zgc:113424 | 0.141 | npm1a | -0.117 |
| trib3 | 0.140 | polr3gla | -0.116 |
| snai1a | 0.140 | eef1a1l1 | -0.111 |
| her3 | 0.139 | hspb1 | -0.109 |
| zic2a | 0.138 | rplp2l | -0.106 |