| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.335 | cyt1 | -0.192 |
| shhb | 0.327 | cyt1l | -0.172 |
| ptch2 | 0.281 | krtt1c19e | -0.166 |
| sox2 | 0.277 | krt5 | -0.161 |
| pitx2 | 0.254 | rbp4 | -0.149 |
| nkx3.3 | 0.249 | aep1 | -0.147 |
| barx1 | 0.227 | lgals1l1 | -0.140 |
| pitx1 | 0.223 | zgc:136930 | -0.130 |
| sox19b | 0.222 | si:dkey-33c14.3 | -0.130 |
| foxa2 | 0.222 | si:dkey-16p21.8 | -0.129 |
| fgfrl1b | 0.219 | wu:fa03e10 | -0.128 |
| krt18a.1 | 0.211 | ptgdsb.1 | -0.123 |
| ephb4a | 0.196 | si:dkey-183i3.5 | -0.120 |
| rpz5 | 0.189 | krt4 | -0.118 |
| fgfrl1a | 0.183 | zgc:175088 | -0.117 |
| igfbp5b | 0.176 | rhbg | -0.114 |
| serpine2 | 0.172 | col17a1a | -0.112 |
| rarga | 0.171 | itgb1b.2 | -0.108 |
| anos1a | 0.169 | col14a1b | -0.107 |
| ociad2 | 0.165 | col2a1b | -0.107 |
| ptgs2a | 0.163 | DSG2 | -0.107 |
| sp6 | 0.162 | tfap2a | -0.106 |
| ntn1a | 0.162 | spaca4l | -0.105 |
| ccnd2a | 0.160 | kera | -0.104 |
| nav2a | 0.159 | CABZ01044281.1 | -0.104 |
| col15a1b | 0.158 | igfbp2a | -0.102 |
| avpr2aa | 0.158 | col1a2 | -0.102 |
| metrnla | 0.157 | col1a1b | -0.101 |
| fzd8a | 0.157 | thy1 | -0.101 |
| si:ch211-251f6.6 | 0.154 | pon3.2 | -0.101 |
| tcf12 | 0.154 | si:ch211-166a6.5 | -0.100 |
| ackr3b | 0.152 | itgb3a | -0.099 |
| fxyd1 | 0.151 | ecrg4b | -0.098 |
| inhbb | 0.151 | cfd | -0.098 |
| dnmt3bb.1 | 0.151 | anxa1a | -0.096 |